RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 TRIM6-TRIM34B2RNG4 842 aa16.35■□□□□ 0.21
UBA3-201ENST00000349511 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
UBA3-201ENST00000349511 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
UBA3-201ENST00000349511 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
UBA3-201ENST00000349511 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
UBA3-201ENST00000349511 TLR7Q9NYK1 1049 aaKnown RBP16.35■□□□□ 0.21
UBA3-201ENST00000349511 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
UBA3-201ENST00000349511 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
UBA3-201ENST00000349511 FAM43AQ8N2R8 423 aa16.34■□□□□ 0.21
UBA3-201ENST00000349511 AK7Q96M32 723 aa16.34■□□□□ 0.21
UBA3-201ENST00000349511 GREM2Q9H772 168 aa16.34■□□□□ 0.21
UBA3-201ENST00000349511 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
UBA3-201ENST00000349511 ZNF652Q9Y2D9 606 aa16.34■□□□□ 0.21
UBA3-201ENST00000349511 ZPR1O75312 459 aa16.33■□□□□ 0.21
UBA3-201ENST00000349511 TBC1D9BQ66K14 1250 aa16.33■□□□□ 0.21
UBA3-201ENST00000349511 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.21
UBA3-201ENST00000349511 BCL2L12Q9HB09 334 aa16.33■□□□□ 0.21
UBA3-201ENST00000349511 STAP2Q9UGK3 403 aa16.33■□□□□ 0.21
UBA3-201ENST00000349511 DDIT3P35638 169 aa16.33■□□□□ 0.2
UBA3-201ENST00000349511 PROM2Q8N271 834 aa16.33■□□□□ 0.2
UBA3-201ENST00000349511 SH3TC1Q8TE82 1336 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 TRAK2O60296 914 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 CDC45O75419 566 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 APBA3O96018 575 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 CSF1RP07333 972 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 C4BP0C0L5 1744 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 ITGA6P23229 1130 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 CTSWP56202 376 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
UBA3-201ENST00000349511 TAF7LQ5H9L4 462 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 CCDC24Q8N4L8 307 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
UBA3-201ENST00000349511 KIF2CQ99661 725 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 GZF1Q9H116 711 aaPredicted RBP16.31■□□□□ 0.2
UBA3-201ENST00000349511 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 GOLGA6L3A6NEY3 463 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 PDE8AO60658 829 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 NTSR2O95665 410 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 RFC4P35249 363 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 CLEC4GQ6UXB4 293 aa16.31■□□□□ 0.2
UBA3-201ENST00000349511 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 BCORQ6W2J9 1755 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.3■□□□□ 0.2
UBA3-201ENST00000349511 EYA2O00167 538 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 TNNI3KQ59H18 835 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 FPGT-TNNI3KV9GXZ4 949 aa16.3■□□□□ 0.2
UBA3-201ENST00000349511 TIMM10P62072 90 aa16.29■□□□□ 0.2
UBA3-201ENST00000349511 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
UBA3-201ENST00000349511 NEUROD6Q96NK8 337 aa16.29■□□□□ 0.2
UBA3-201ENST00000349511 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
UBA3-201ENST00000349511 MYH3P11055 1940 aa16.29■□□□□ 0.2
UBA3-201ENST00000349511 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBA3-201ENST00000349511 GTF2E1P29083 439 aaPredicted RBP16.28■□□□□ 0.2
UBA3-201ENST00000349511 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
UBA3-201ENST00000349511 DBNLQ9UJU6 430 aaKnown RBP16.28■□□□□ 0.2
UBA3-201ENST00000349511 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 SETDB2Q96T68 719 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 DBNDD2Q9BQY9 259 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
UBA3-201ENST00000349511 ANKRD18BA2A2Z9 1011 aa16.27■□□□□ 0.2
UBA3-201ENST00000349511 IL15P40933 162 aaPredicted RBP16.27■□□□□ 0.2
UBA3-201ENST00000349511 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
UBA3-201ENST00000349511 GPATCH3Q96I76 525 aa16.27■□□□□ 0.19
UBA3-201ENST00000349511 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.19
UBA3-201ENST00000349511 TTC41PQ6P2S7 1318 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 GOLGB1Q14789 3259 aaKnown RBP16.26■□□□□ 0.19
UBA3-201ENST00000349511 ERC2O15083 957 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 GLRX3O76003 335 aaKnown RBP16.26■□□□□ 0.19
UBA3-201ENST00000349511 CD2BP2O95400 341 aaKnown RBP16.26■□□□□ 0.19
UBA3-201ENST00000349511 C3orf67Q6ZVT6 689 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
UBA3-201ENST00000349511 CNNM1Q9NRU3 951 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 TUBGCP6Q96RT7 1819 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 AOX1Q06278 1338 aa16.26■□□□□ 0.19
UBA3-201ENST00000349511 USP42Q9H9J4 1324 aaKnown RBP16.26■□□□□ 0.19
UBA3-201ENST00000349511 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
UBA3-201ENST00000349511 C4AP0C0L4 1744 aa16.25■□□□□ 0.19
UBA3-201ENST00000349511 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
UBA3-201ENST00000349511 NBPF5PQ86XG9 351 aaPredicted RBP16.25■□□□□ 0.19
UBA3-201ENST00000349511 EDC3Q96F86 508 aaKnown RBP16.25■□□□□ 0.19
UBA3-201ENST00000349511 CEP126Q9P2H0 1117 aa16.25■□□□□ 0.19
UBA3-201ENST00000349511 DDX60Q8IY21 1712 aaKnown RBP16.24■□□□□ 0.19
UBA3-201ENST00000349511 NPHP1O15259 732 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 CIAO1O76071 339 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
UBA3-201ENST00000349511 A0A1B0GUL7 405 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
UBA3-201ENST00000349511 RAB3GAP1Q15042 981 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 CNTROBQ8N137 903 aa16.24■□□□□ 0.19
UBA3-201ENST00000349511 RIPOR2Q9Y4F9 1068 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms