RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 CASTP20810 708 aaKnown RBP12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 RASSF4Q9H2L5 321 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 CEMIPQ8WUJ3 1361 aa12.12□□□□□ -0.47
CHRNA1-202ENST00000348749 GOLGA6L19H0YKK7 550 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 PDCP20941 246 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 KCNJ6P48051 423 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 GSDMDP57764 484 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 LARP6Q9BRS8 491 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 ARGLU1Q9NWB6 273 aaPredicted RBP12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 MARF1Q9Y4F3 1742 aaKnown RBP12.11□□□□□ -0.47
CHRNA1-202ENST00000348749 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 CYP46A1Q9Y6A2 500 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 LARP1BQ659C4 914 aaKnown RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 CDC37L1Q7L3B6 337 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 NUTM1Q86Y26 1132 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 SPATA32Q96LK8 384 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 CHMP3Q9Y3E7 222 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 SLIT1O75093 1534 aa12.1□□□□□ -0.47
CHRNA1-202ENST00000348749 SRGAP3O43295 1099 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 GIGYF1O75420 1035 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 HOXC9P31274 260 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 NR1I2O75469 434 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 ALDH1L1O75891 902 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 ZKSCAN1P17029 563 aaPredicted RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 PSMA5P28066 241 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 NOP2P46087 812 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 GPS2Q13227 327 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 ANKRD1Q15327 319 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 ME3Q16798 604 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 ARHGAP29Q52LW3 1261 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 BEND3Q5T5X7 828 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 CLASRPQ8N2M8 674 aaKnown RBP12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 RGS22Q8NE09 1264 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 NEK11Q8NG66 645 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 IMPACTQ9P2X3 320 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
CHRNA1-202ENST00000348749 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 CTAGE5O15320 804 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 DHX8Q14562 1220 aaKnown RBP12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 STX1AQ16623 288 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 SYT10Q6XYQ8 523 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 KRBA2Q6ZNG9 492 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 NGDNQ8NEJ9 315 aaKnown RBP12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 ECHDC1Q9NTX5 307 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 CWC15Q9P013 229 aaKnown RBP12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 ORC3Q9UBD5 711 aaPredicted RBP12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 RSPH14Q9UHP6 348 aa12.08□□□□□ -0.48
CHRNA1-202ENST00000348749 TPM1P09493 284 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 CPA1P15085 419 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 PGBD1Q96JS3 809 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 JAKMIP1Q96N16 626 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 GEMIN8Q9NWZ8 242 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 RGPD8O14715 1765 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 MYO1CO00159 1063 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 NECTIN1Q15223 517 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 C11orf57Q6ZUT1 292 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 PPP1R13BQ96KQ4 1090 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 SRRTQ9BXP5 876 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 PSD3Q9NYI0 1048 aa12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 PHRF1Q9P1Y6 1649 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-202ENST00000348749 NCAPD2Q15021 1401 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 NPHP1O15259 732 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 CASQ1P31415 396 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 MLECQ14165 292 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 ZSCAN26Q16670 478 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 CWC27Q6UX04 472 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 IQUBQ8NA54 791 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms