RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TMTC2Q8N394 836 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 DYDC1Q8WWB3 177 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
UBE3B-202ENST00000342494 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 KIF2AO00139 706 aaPredicted RBP17.25■□□□□ 0.35
UBE3B-202ENST00000342494 CNNM2Q9H8M5 875 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 DDX19AQ9NUU7 478 aaKnown RBP17.25■□□□□ 0.35
UBE3B-202ENST00000342494 BRPF3Q9ULD4 1205 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 COMMD10Q9Y6G5 202 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 KLF18A0A0U1RQI7 1052 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 BIN1O00499 593 aa17.25■□□□□ 0.35
UBE3B-202ENST00000342494 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 PAFAH1B1P43034 410 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 GBP3Q9H0R5 595 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 KSR2Q6VAB6 950 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 ZBTB43O43298 467 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 GNAQP50148 359 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 RBM10P98175 930 aaKnown RBP17.24■□□□□ 0.35
UBE3B-202ENST00000342494 KANK3Q6NY19 840 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 PTPN14Q15678 1187 aa17.24■□□□□ 0.35
UBE3B-202ENST00000342494 STX6O43752 255 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 PLS1Q14651 629 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 B4DLN1 442 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 MRPL12P52815 198 aaKnown RBP17.23■□□□□ 0.35
UBE3B-202ENST00000342494 SLC9C2Q5TAH2 1124 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 HEATR3Q7Z4Q2 680 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 WDR7Q9Y4E6 1490 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 BRF1Q92994 677 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 EYA3Q99504 573 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 RIMS2Q9UQ26 1411 aa17.23■□□□□ 0.35
UBE3B-202ENST00000342494 TMCO5BA8MYB1 307 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 CASQ1P31415 396 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 NFATC2IPQ8NCF5 419 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 BMP2KLQ5H9B9 411 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 TTC22Q5TAA0 569 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 RTN1Q16799 776 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 FERMT1Q9BQL6 677 aa17.22■□□□□ 0.35
UBE3B-202ENST00000342494 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-202ENST00000342494 IFFO1Q0D2I5 559 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 USP37Q86T82 979 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 PLCG2P16885 1265 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 CALRP27797 417 aaKnown RBP17.21■□□□□ 0.35
UBE3B-202ENST00000342494 MAP3K9P80192 1104 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 MEIS3Q99687 375 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 LMTK3Q96Q04 1460 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 RBM25P49756 843 aaKnown RBP17.21■□□□□ 0.35
UBE3B-202ENST00000342494 ALS2CR12Q96Q35 445 aa17.21■□□□□ 0.35
UBE3B-202ENST00000342494 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-202ENST00000342494 SSFA2P28290 1259 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-202ENST00000342494 NOP2P46087 812 aaKnown RBP17.2■□□□□ 0.34
UBE3B-202ENST00000342494 NAPAP54920 295 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 TRIM47Q96LD4 638 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-202ENST00000342494 NCKAP5LQ9HCH0 1330 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 BMP15O95972 392 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
UBE3B-202ENST00000342494 MAP9Q49MG5 647 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 TAOK3Q9H2K8 898 aa17.2■□□□□ 0.34
UBE3B-202ENST00000342494 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
UBE3B-202ENST00000342494 STX1AQ16623 288 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 PHACTR2O75167 634 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
UBE3B-202ENST00000342494 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 SYNCQ9H7C4 482 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 GDPD2Q9HCC8 539 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
UBE3B-202ENST00000342494 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-202ENST00000342494 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 UQCRHLA0A096LP55 91 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 GNPATO15228 680 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 UQCRHP07919 91 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 KIF18AQ8NI77 898 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 PABPN1LA6NDY0 278 aaKnown RBP17.18■□□□□ 0.34
UBE3B-202ENST00000342494 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 DCAF5Q96JK2 942 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 TCHPQ9BT92 498 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 ACTN2P35609 894 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 ISM2Q6H9L7 571 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 CCDC172P0C7W6 258 aa17.18■□□□□ 0.34
UBE3B-202ENST00000342494 SKAP1Q86WV1 359 aa17.17■□□□□ 0.34
UBE3B-202ENST00000342494 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
UBE3B-202ENST00000342494 ZSCAN16Q9H4T2 348 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms