RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 EXOC5O00471 708 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 SLC12A7Q9Y666 1083 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 SBNO1A3KN83 1393 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 JAK2O60674 1132 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 TNNT1P13805 278 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
CDH5-201ENST00000341529 ANTXR1Q9H6X2 564 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 PAG1Q9NWQ8 432 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 NEO1Q92859 1461 aa13.95□□□□□ -0.18
CDH5-201ENST00000341529 CCDC47Q96A33 483 aaKnown RBP13.95□□□□□ -0.18
CDH5-201ENST00000341529 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
CDH5-201ENST00000341529 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
CDH5-201ENST00000341529 SFPQP23246 707 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDH5-201ENST00000341529 MIGA1Q8NAN2 632 aa13.94□□□□□ -0.18
CDH5-201ENST00000341529 NPHP3Q7Z494 1330 aa13.94□□□□□ -0.18
CDH5-201ENST00000341529 SLC3A2P08195 630 aaKnown RBP13.94□□□□□ -0.18
CDH5-201ENST00000341529 ANO10Q9NW15 660 aa13.94□□□□□ -0.18
CDH5-201ENST00000341529 ZFYVE16Q7Z3T8 1539 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 UBAP1LF5GYI3 381 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 CDKL5O76039 1030 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 USP5P45974 858 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 TMC6Q7Z403 805 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 TSC1Q92574 1164 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 ZKSCAN3Q9BRR0 538 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 DDX19AQ9NUU7 478 aaKnown RBP13.93□□□□□ -0.18
CDH5-201ENST00000341529 IARSP41252 1262 aaKnown RBP13.93□□□□□ -0.18
CDH5-201ENST00000341529 RUFY3Q7L099 469 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
CDH5-201ENST00000341529 METAP2P50579 478 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDH5-201ENST00000341529 PTPN14Q15678 1187 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 BTG4Q9NY30 223 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 ZKSCAN5Q9Y2L8 839 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 KDM5AP29375 1690 aaKnown RBP13.92□□□□□ -0.18
CDH5-201ENST00000341529 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
CDH5-201ENST00000341529 SLC27A2O14975 620 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
CDH5-201ENST00000341529 PTGS1P23219 599 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 TTC41PQ6P2S7 1318 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 PTPDC1A2A3K4 754 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 LMOD1P29536 600 aaPredicted RBP13.92□□□□□ -0.18
CDH5-201ENST00000341529 TYRO3Q06418 890 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
CDH5-201ENST00000341529 PRC1O43663 620 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 NOLC1Q14978 699 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH5-201ENST00000341529 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
CDH5-201ENST00000341529 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
CDH5-201ENST00000341529 A0A0D9SFI3 127 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 A0A1B0GUL7 405 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 RRP9O43818 475 aaKnown RBP13.91□□□□□ -0.18
CDH5-201ENST00000341529 IGSF3O75054 1194 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 CDC37L1Q7L3B6 337 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
CDH5-201ENST00000341529 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
CDH5-201ENST00000341529 URI1O94763 535 aaPredicted RBP13.91□□□□□ -0.18
CDH5-201ENST00000341529 RAD50Q92878 1312 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 TRPM2O94759 1503 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 OFD1O75665 1012 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 ZNF853P0CG23 659 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 MCM5P33992 734 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 IL15P40933 162 aaPredicted RBP13.9□□□□□ -0.18
CDH5-201ENST00000341529 AOPEPQ8N6M6 819 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 TXLNAP40222 546 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 ARGLU1Q9NWB6 273 aaPredicted RBP13.9□□□□□ -0.18
CDH5-201ENST00000341529 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 SLC5A1P13866 664 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 GCKRQ14397 625 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 TNNI3KQ59H18 835 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
CDH5-201ENST00000341529 FPGT-TNNI3KV9GXZ4 949 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 MLH3Q9UHC1 1453 aa13.9□□□□□ -0.18
CDH5-201ENST00000341529 RBM5P52756 815 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH5-201ENST00000341529 ME3Q16798 604 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 FAM200AQ8TCP9 573 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 SSH3Q8TE77 659 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 CDK5RAP3Q96JB5 506 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 TTLL7Q6ZT98 887 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 ZSCAN29Q8IWY8 852 aaPredicted RBP13.89□□□□□ -0.19
CDH5-201ENST00000341529 GPT2Q8TD30 523 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 MKNK2Q9HBH9 465 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 ERICH4A6NGS2 130 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
CDH5-201ENST00000341529 HSPA4P34932 840 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 AFMP43652 599 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms