RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 BANK1Q8NDB2 785 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
TPM3-207ENST00000341372 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 ERVV-1B6SEH8 477 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
TPM3-207ENST00000341372 SSTR3P32745 418 aaPredicted RBP13.25□□□□□ -0.29
TPM3-207ENST00000341372 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 ANKRD31Q8N7Z5 1873 aa13.25□□□□□ -0.29
TPM3-207ENST00000341372 MAP3K15Q6ZN16 1313 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 ANKRD36CQ5JPF3 1778 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 RFC5P40937 340 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 PTGDRQ13258 359 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
TPM3-207ENST00000341372 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
TPM3-207ENST00000341372 MAP3K13O43283 966 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 MYL6BP14649 208 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 TGFB2P61812 414 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
TPM3-207ENST00000341372 MTMR14Q8NCE2 650 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 SERPINB2P05120 415 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 CLCN1P35523 988 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 TTLL7Q6ZT98 887 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
TPM3-207ENST00000341372 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
TPM3-207ENST00000341372 TBC1D12O60347 775 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 KIF6Q6ZMV9 814 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 GPCPD1Q9NPB8 672 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 CHPF2Q9P2E5 772 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
TPM3-207ENST00000341372 ANXA1P04083 346 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 RFX1P22670 979 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 HLFQ16534 295 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 MYSM1Q5VVJ2 828 aa13.22□□□□□ -0.29
TPM3-207ENST00000341372 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
TPM3-207ENST00000341372 BICDL1Q6ZP65 573 aa13.21□□□□□ -0.29
TPM3-207ENST00000341372 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
TPM3-207ENST00000341372 SETDB2Q96T68 719 aa13.21□□□□□ -0.29
TPM3-207ENST00000341372 CACNA1FO60840 1977 aa13.21□□□□□ -0.3
TPM3-207ENST00000341372 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.3
TPM3-207ENST00000341372 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 SALL2Q9Y467 1007 aaPredicted RBP13.2□□□□□ -0.3
TPM3-207ENST00000341372 COL11A2P13942 1736 aaPredicted RBP13.2□□□□□ -0.3
TPM3-207ENST00000341372 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 CHD4Q14839 1912 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
TPM3-207ENST00000341372 YBX3P16989 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM3-207ENST00000341372 KCNA3P22001 575 aa13.19□□□□□ -0.3
TPM3-207ENST00000341372 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
TPM3-207ENST00000341372 COPS6Q7L5N1 327 aa13.19□□□□□ -0.3
TPM3-207ENST00000341372 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
TPM3-207ENST00000341372 NIP7Q9Y221 180 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM3-207ENST00000341372 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
TPM3-207ENST00000341372 DPEP1P16444 411 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 ABL2P42684 1182 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 ZNF34Q8IZ26 560 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 MYH16Q9H6N6 1097 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 ELL2O00472 640 aaPredicted RBP13.18□□□□□ -0.3
TPM3-207ENST00000341372 TWISTNBQ3B726 338 aaPredicted RBP13.18□□□□□ -0.3
TPM3-207ENST00000341372 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
TPM3-207ENST00000341372 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
TPM3-207ENST00000341372 A0A0G2JLW4 131 aa13.17□□□□□ -0.3
TPM3-207ENST00000341372 GOLGA2Q08379 1002 aa13.17□□□□□ -0.3
TPM3-207ENST00000341372 GPR162Q16538 588 aa13.17□□□□□ -0.3
TPM3-207ENST00000341372 BRIP1Q9BX63 1249 aa13.17□□□□□ -0.3
TPM3-207ENST00000341372 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
TPM3-207ENST00000341372 NBPF5PQ86XG9 351 aaPredicted RBP13.17□□□□□ -0.3
TPM3-207ENST00000341372 TNRC6CQ9HCJ0 1690 aaKnown RBP13.17□□□□□ -0.3
TPM3-207ENST00000341372 UTRNP46939 3433 aa13.16□□□□□ -0.3
TPM3-207ENST00000341372 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
TPM3-207ENST00000341372 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
TPM3-207ENST00000341372 PLBD2Q8NHP8 589 aa13.16□□□□□ -0.3
TPM3-207ENST00000341372 DDX12PQ92771 950 aa13.16□□□□□ -0.3
TPM3-207ENST00000341372 GRIN3BO60391 1043 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 VAMP4O75379 141 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 CHRNA5P30532 468 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 ST5P78524 1137 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
TPM3-207ENST00000341372 AIMP1Q12904 312 aaKnown RBP13.15□□□□□ -0.3
TPM3-207ENST00000341372 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 ABCC12Q96J65 1359 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
TPM3-207ENST00000341372 PDE6BP35913 854 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 NYXQ9GZU5 481 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 PIM2Q9P1W9 311 aa13.15□□□□□ -0.3
TPM3-207ENST00000341372 NTSR2O95665 410 aa13.14□□□□□ -0.31
TPM3-207ENST00000341372 TCIRG1Q13488 830 aa13.14□□□□□ -0.31
TPM3-207ENST00000341372 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms