RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 CCDC171Q6TFL3 1326 aa18.16■□□□□ 0.5
PERM1-201ENST00000341290 LETM1O95202 739 aaPredicted RBP18.16■□□□□ 0.5
PERM1-201ENST00000341290 ZSCAN20P17040 1043 aaPredicted RBP18.16■□□□□ 0.5
PERM1-201ENST00000341290 HSPA1LP34931 641 aa18.16■□□□□ 0.5
PERM1-201ENST00000341290 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
PERM1-201ENST00000341290 FUCA2Q9BTY2 467 aa18.16■□□□□ 0.5
PERM1-201ENST00000341290 A0A0D9SFI3 127 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 CHGBP05060 677 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 SUCLG2Q96I99 432 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
PERM1-201ENST00000341290 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 FSD1Q9BTV5 496 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 KCNF1Q9H3M0 494 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 BICC1Q9H694 974 aaKnown RBP18.15■□□□□ 0.5
PERM1-201ENST00000341290 SASH1O94885 1247 aa18.15■□□□□ 0.5
PERM1-201ENST00000341290 GTF2E1P29083 439 aaPredicted RBP18.15■□□□□ 0.5
PERM1-201ENST00000341290 DBF4Q9UBU7 674 aaPredicted RBP18.15■□□□□ 0.5
PERM1-201ENST00000341290 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
PERM1-201ENST00000341290 CEMIPQ8WUJ3 1361 aa18.14■□□□□ 0.49
PERM1-201ENST00000341290 FOSBP53539 338 aa18.14■□□□□ 0.49
PERM1-201ENST00000341290 MTERF4Q7Z6M4 381 aaKnown RBP18.14■□□□□ 0.49
PERM1-201ENST00000341290 CCDC94Q9BW85 323 aaPredicted RBP18.14■□□□□ 0.49
PERM1-201ENST00000341290 SLC27A2O14975 620 aa18.13■□□□□ 0.49
PERM1-201ENST00000341290 PIP4K2AP48426 406 aaPredicted RBP18.13■□□□□ 0.49
PERM1-201ENST00000341290 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
PERM1-201ENST00000341290 G3BP1Q13283 466 aaKnown RBP eCLIP18.13■□□□□ 0.49
PERM1-201ENST00000341290 DDX11Q96FC9 970 aa18.13■□□□□ 0.49
PERM1-201ENST00000341290 CCDC192P0DO97 292 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 LARP1Q6PKG0 1096 aaKnown RBP18.12■□□□□ 0.49
PERM1-201ENST00000341290 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
PERM1-201ENST00000341290 ZSCAN31Q96LW9 406 aaPredicted RBP18.12■□□□□ 0.49
PERM1-201ENST00000341290 SH2B1Q9NRF2 756 aaPredicted RBP18.12■□□□□ 0.49
PERM1-201ENST00000341290 MYL6BP14649 208 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 ZNF710Q8N1W2 664 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 GOLGA6L4A6NEF3 574 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 KRT85P78386 507 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 PPP4R3BQ5MIZ7 849 aa18.12■□□□□ 0.49
PERM1-201ENST00000341290 PTGS1P23219 599 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 CEBPZQ03701 1054 aaKnown RBP18.11■□□□□ 0.49
PERM1-201ENST00000341290 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 THSD7AQ9UPZ6 1657 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
PERM1-201ENST00000341290 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
PERM1-201ENST00000341290 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 C1orf141Q5JVX7 400 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 BLOC1S2Q6QNY1 142 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 NUP62CLQ9H1M0 184 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 ERBB3P21860 1342 aa18.11■□□□□ 0.49
PERM1-201ENST00000341290 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
PERM1-201ENST00000341290 LRRC2Q9BYS8 371 aa18.1■□□□□ 0.49
PERM1-201ENST00000341290 JAK2O60674 1132 aa18.1■□□□□ 0.49
PERM1-201ENST00000341290 IGSF3O75054 1194 aa18.1■□□□□ 0.49
PERM1-201ENST00000341290 DRC7Q8IY82 874 aa18.1■□□□□ 0.49
PERM1-201ENST00000341290 GRM8O00222 908 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 MAP3K11Q16584 847 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 UTP14CQ5TAP6 766 aaKnown RBP18.09■□□□□ 0.49
PERM1-201ENST00000341290 NRBP1Q9UHY1 535 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 RNMTO43148 476 aaKnown RBP18.09■□□□□ 0.49
PERM1-201ENST00000341290 TYRO3Q06418 890 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 LRMPQ12912 555 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 AKAP4Q5JQC9 854 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 CABLES1Q8TDN4 633 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 MRVI1Q9Y6F6 885 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 DISP2A7MBM2 1401 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 MTX1Q13505 466 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 ANO6Q4KMQ2 910 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 CCDC129Q6ZRS4 1044 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 SPATA32Q96LK8 384 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 TM6SF1Q9BZW5 370 aa18.09■□□□□ 0.49
PERM1-201ENST00000341290 ERC1Q8IUD2 1116 aa18.08■□□□□ 0.49
PERM1-201ENST00000341290 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.49
PERM1-201ENST00000341290 KDM3BQ7LBC6 1761 aa18.08■□□□□ 0.48
PERM1-201ENST00000341290 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
PERM1-201ENST00000341290 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
PERM1-201ENST00000341290 AXIN2Q9Y2T1 843 aa18.08■□□□□ 0.48
PERM1-201ENST00000341290 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 VGLL3A8MV65 326 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
PERM1-201ENST00000341290 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 FNBP4Q8N3X1 1017 aaPredicted RBP18.07■□□□□ 0.48
PERM1-201ENST00000341290 KIF3AQ9Y496 699 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
PERM1-201ENST00000341290 HOXB7P09629 217 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 BICD2Q8TD16 824 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 PRIMPOLQ96LW4 560 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 SEC62Q99442 399 aaKnown RBP18.07■□□□□ 0.48
PERM1-201ENST00000341290 WDR17Q8IZU2 1322 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 PSMA5P28066 241 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 EPHA10Q5JZY3 1008 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 SPTLC3Q9NUV7 552 aa18.07■□□□□ 0.48
PERM1-201ENST00000341290 NR1I2O75469 434 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 CCDC186Q7Z3E2 898 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 FAM200AQ8TCP9 573 aa18.06■□□□□ 0.48
PERM1-201ENST00000341290 A0A087WWV3 80 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms