RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 F13A1P00488 732 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 GAS2L3Q86XJ1 694 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 MAP4K1Q92918 833 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 ZDHHC9Q9Y397 364 aa9.46□□□□□ -0.9
NBR1-201ENST00000341165 ATP5J2-PTCD1G3V325 749 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 PTCD1O75127 700 aaKnown RBP9.45□□□□□ -0.9
NBR1-201ENST00000341165 TTC14Q96N46 770 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 KRT85P78386 507 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 CCDC191Q8NCU4 936 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 PPP1R9BQ96SB3 815 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 TMOD3Q9NYL9 352 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 SLC27A2O14975 620 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 CYP27B1O15528 508 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 TFCP2Q12800 502 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 CCDC158Q5M9N0 1113 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 USP48Q86UV5 1035 aa9.45□□□□□ -0.9
NBR1-201ENST00000341165 DDX54Q8TDD1 881 aaKnown RBP9.45□□□□□ -0.9
NBR1-201ENST00000341165 KDM6AO15550 1401 aaPredicted RBP9.45□□□□□ -0.9
NBR1-201ENST00000341165 H3BQV1 296 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 CCDC57Q2TAC2 916 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 UVSSAQ2YD98 709 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 MCMDC2Q4G0Z9 681 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 LMBR1LQ6UX01 489 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 GPR108Q9NPR9 543 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 CEP126Q9P2H0 1117 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 COL15A1P39059 1388 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 STARD3NLO95772 234 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 SYT1P21579 422 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 PTH1RQ03431 593 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 GPT2Q8TD30 523 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
NBR1-201ENST00000341165 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
NBR1-201ENST00000341165 NECTIN1Q15223 517 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 GPATCH11Q8N954 259 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 KCNB2Q92953 911 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
NBR1-201ENST00000341165 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
NBR1-201ENST00000341165 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
NBR1-201ENST00000341165 FIBPO43427 364 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 RABL6Q3YEC7 729 aaPredicted RBP9.43□□□□□ -0.9
NBR1-201ENST00000341165 HSP90AB3PQ58FF7 597 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 FAM227BQ96M60 508 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 NEK1Q96PY6 1258 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 STRN4Q9NRL3 753 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 TRPM3Q9HCF6 1732 aaPredicted RBP9.43□□□□□ -0.9
NBR1-201ENST00000341165 RPS6KB1P23443 525 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 FAM193AP78312 1265 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 CARD10Q9BWT7 1032 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
NBR1-201ENST00000341165 CAMTA1Q9Y6Y1 1673 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 MEGF6O75095 1541 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 MCM5P33992 734 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 SCAND2PQ9GZW5 306 aaPredicted RBP9.43□□□□□ -0.9
NBR1-201ENST00000341165 HELLSQ9NRZ9 838 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 ATG3Q9NT62 314 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 CTNNA3Q9UI47 895 aa9.43□□□□□ -0.9
NBR1-201ENST00000341165 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
NBR1-201ENST00000341165 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 HAUS7Q99871 368 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 RRAGDQ9NQL2 400 aaPredicted RBP9.42□□□□□ -0.9
NBR1-201ENST00000341165 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 IFIT1P09914 478 aaKnown RBP9.42□□□□□ -0.9
NBR1-201ENST00000341165 RGPD2P0DJD1 1756 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 KLHDC4Q8TBB5 520 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 KAZALD1Q96I82 304 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 SNRKQ9NRH2 765 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
NBR1-201ENST00000341165 KBTBD3Q8NAB2 608 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 A0A0D9SFI3 127 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 H7C1W4 665 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 EYA2O00167 538 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 SETQ01105 290 aaPredicted RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 ZSCAN25Q6NSZ9 544 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 RBSNQ9H1K0 784 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 IL25Q9H293 177 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 PAG1Q9NWQ8 432 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 AK9Q5TCS8 1911 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 CIAO1O76071 339 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 PIP4K2AP48426 406 aaPredicted RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 TSGA10IPQ3SY00 556 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 BRINP3Q76B58 766 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 TLR7Q9NYK1 1049 aaKnown RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 HMGN5P82970 282 aaKnown RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 RNF214Q8ND24 703 aa9.41□□□□□ -0.9
NBR1-201ENST00000341165 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.41□□□□□ -0.93e-6■□□□□ 10.9
NBR1-201ENST00000341165 DBNLQ9UJU6 430 aaKnown RBP9.41□□□□□ -0.9
NBR1-201ENST00000341165 EPHA10Q5JZY3 1008 aa9.4□□□□□ -0.9
NBR1-201ENST00000341165 DBNDD2Q9BQY9 259 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms