RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 RREB1Q92766 1687 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 A0A0D9SFI3 127 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 TAF5LO75529 589 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 FAM227BQ96M60 508 aa12.85□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 PRPF40AO75400 957 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 BCL9O00512 1426 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 SIL1Q9H173 461 aa12.84□□□□□ -0.35
TRAF3IP2-201ENST00000340026 EYA2O00167 538 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ADCK5Q3MIX3 580 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TTLL7Q6ZT98 887 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 KLHDC4Q8TBB5 520 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 SYAP1Q96A49 352 aaPredicted RBP12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PANK2Q9BZ23 570 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 STX6O43752 255 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LRP5O75197 1615 aa12.83□□□□□ -0.36
TRAF3IP2-201ENST00000340026 MYH3P11055 1940 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ATP5J2-PTCD1G3V325 749 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PCCAP05165 728 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CSF1RP07333 972 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 SMC3Q9UQE7 1217 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ZNF831Q5JPB2 1677 aa12.82□□□□□ -0.36
TRAF3IP2-201ENST00000340026 A1BGP04217 495 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 SYT1P21579 422 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 DSCC1Q9BVC3 393 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 F13A1P00488 732 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 HSP90AB3PQ58FF7 597 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 BLOC1S2Q6QNY1 142 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PHF14O94880 888 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PDCP20941 246 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 EVA1CP58658 441 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TMEM63CQ9P1W3 806 aa12.81□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 STARD3NLO95772 234 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 HMGB1P09429 215 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PDLIM2Q96JY6 352 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TCHHQ07283 1943 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LETM1O95202 739 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CLCN1P35523 988 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ME3Q16798 604 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 MTMR6Q9Y217 621 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 MAP3K15Q6ZN16 1313 aa12.8□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LAMA4Q16363 1823 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 GIGYF2Q6Y7W6 1299 aaKnown RBP12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 AGXT2Q9BYV1 514 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 AKAP2Q9Y2D5 859 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LARGE1O95461 756 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 UBE2HP62256 183 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PIGBQ92521 554 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 AK7Q96M32 723 aa12.79□□□□□ -0.36
TRAF3IP2-201ENST00000340026 MYH7P12883 1935 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 KCNJ4P48050 445 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 NUP98P52948 1817 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ELP1O95163 1332 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 NWD2Q9ULI1 1742 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 NCLP19338 710 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 GJB2P29033 226 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 RGS22Q8NE09 1264 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 CHMP4CQ96CF2 233 aa12.78□□□□□ -0.36
TRAF3IP2-201ENST00000340026 LAMB2P55268 1798 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms