RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CCDC57Q2TAC2 916 aa18.68■□□□□ 0.58
MBD1-203ENST00000339998 TCEANC2Q96MN5 208 aa18.68■□□□□ 0.58
MBD1-203ENST00000339998 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
MBD1-203ENST00000339998 ADORA1P30542 326 aa18.67■□□□□ 0.58
MBD1-203ENST00000339998 GREM2Q9H772 168 aa18.67■□□□□ 0.58
MBD1-203ENST00000339998 TRMT112Q9UI30 125 aaKnown RBP18.67■□□□□ 0.58
MBD1-203ENST00000339998 UBN2Q6ZU65 1347 aa18.67■□□□□ 0.58
MBD1-203ENST00000339998 KCNJ4P48050 445 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 A0A1B0GUL7 405 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 GOLIM4O00461 696 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 ATP5JP18859 108 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 CASTP20810 708 aaKnown RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 ANAPC15P60006 121 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 ZBTB38Q8NAP3 1195 aaPredicted RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 RBM8AQ9Y5S9 174 aaKnown RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 COL15A1P39059 1388 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 LOC102724428A0A0B4J2F2 783 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 TRAK2O60296 914 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 CRKLP46109 303 aaKnown RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 SIK1P57059 783 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 INTS5Q6P9B9 1019 aaKnown RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
MBD1-203ENST00000339998 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
MBD1-203ENST00000339998 CCDC171Q6TFL3 1326 aa18.65■□□□□ 0.58
MBD1-203ENST00000339998 PCCAP05165 728 aaPredicted RBP18.65■□□□□ 0.58
MBD1-203ENST00000339998 RUFY2Q8WXA3 655 aa18.65■□□□□ 0.58
MBD1-203ENST00000339998 CIZ1Q9ULV3 898 aaPredicted RBP18.65■□□□□ 0.58
MBD1-203ENST00000339998 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
MBD1-203ENST00000339998 JAKMIP1Q96N16 626 aaKnown RBP18.65■□□□□ 0.58
MBD1-203ENST00000339998 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
MBD1-203ENST00000339998 AK2P54819 239 aa18.64■□□□□ 0.57
MBD1-203ENST00000339998 PI16Q6UXB8 463 aa18.64■□□□□ 0.57
MBD1-203ENST00000339998 SNAP23O00161 211 aa18.64■□□□□ 0.57
MBD1-203ENST00000339998 IL15P40933 162 aaPredicted RBP18.64■□□□□ 0.57
MBD1-203ENST00000339998 NRAPQ86VF7 1730 aa18.64■□□□□ 0.57
MBD1-203ENST00000339998 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
MBD1-203ENST00000339998 LARGE1O95461 756 aa18.63■□□□□ 0.57
MBD1-203ENST00000339998 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
MBD1-203ENST00000339998 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
MBD1-203ENST00000339998 ITGA6P23229 1130 aa18.63■□□□□ 0.57
MBD1-203ENST00000339998 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
MBD1-203ENST00000339998 NECTIN1Q15223 517 aa18.63■□□□□ 0.57
MBD1-203ENST00000339998 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
MBD1-203ENST00000339998 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
MBD1-203ENST00000339998 HELBQ8NG08 1087 aaPredicted RBP18.62■□□□□ 0.57
MBD1-203ENST00000339998 CEP126Q9P2H0 1117 aa18.62■□□□□ 0.57
MBD1-203ENST00000339998 MYH14Q7Z406 1995 aaKnown RBP18.62■□□□□ 0.57
MBD1-203ENST00000339998 SCARF1Q14162 830 aa18.62■□□□□ 0.57
MBD1-203ENST00000339998 HAUS7Q99871 368 aa18.62■□□□□ 0.57
MBD1-203ENST00000339998 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
MBD1-203ENST00000339998 IL6STP40189 918 aaPredicted RBP18.61■□□□□ 0.57
MBD1-203ENST00000339998 FKBP4Q02790 459 aaKnown RBP eCLIP18.61■□□□□ 0.57
MBD1-203ENST00000339998 HSP90AB3PQ58FF7 597 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
MBD1-203ENST00000339998 SLIT2O94813 1529 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 A0A0G2JLW4 131 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 BAG4O95429 457 aaKnown RBP18.61■□□□□ 0.57
MBD1-203ENST00000339998 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
MBD1-203ENST00000339998 SUSD4Q5VX71 490 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 TTC14Q96N46 770 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 WNK3Q9BYP7 1800 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 ZNF609O15014 1411 aa18.61■□□□□ 0.57
MBD1-203ENST00000339998 MCTP1Q6DN14 999 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 LDHAL6AQ6ZMR3 332 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 LRP6O75581 1613 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 CSF1RP07333 972 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 VPS53Q5VIR6 699 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
MBD1-203ENST00000339998 NUP98P52948 1817 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 SLC27A2O14975 620 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 IFIT1P09914 478 aaKnown RBP18.6■□□□□ 0.57
MBD1-203ENST00000339998 XAGE2Q96GT9 111 aa18.6■□□□□ 0.57
MBD1-203ENST00000339998 TAF5LO75529 589 aa18.59■□□□□ 0.57
MBD1-203ENST00000339998 CYP2E1P05181 493 aaPredicted RBP18.59■□□□□ 0.57
MBD1-203ENST00000339998 PAG1Q9NWQ8 432 aa18.59■□□□□ 0.57
MBD1-203ENST00000339998 CTSWP56202 376 aa18.59■□□□□ 0.57
MBD1-203ENST00000339998 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
MBD1-203ENST00000339998 GORABQ5T7V8 394 aa18.58■□□□□ 0.57
MBD1-203ENST00000339998 SEC31BQ9NQW1 1179 aa18.58■□□□□ 0.57
MBD1-203ENST00000339998 MED23Q9ULK4 1368 aa18.58■□□□□ 0.57
MBD1-203ENST00000339998 CUL4AQ13619 759 aa18.58■□□□□ 0.56
MBD1-203ENST00000339998 METTL24Q5JXM2 366 aa18.58■□□□□ 0.56
MBD1-203ENST00000339998 BCL9LQ86UU0 1499 aa18.58■□□□□ 0.56
MBD1-203ENST00000339998 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 ZNF34Q8IZ26 560 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 NECAB1Q8N987 351 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 KBTBD3Q8NAB2 608 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 BICDL1Q6ZP65 573 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 PDRG1Q9NUG6 133 aa18.57■□□□□ 0.56
MBD1-203ENST00000339998 DDX11L8A8MPP1 907 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 HIP1O00291 1037 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 RIPOR2Q9Y4F9 1068 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 CIAO1O76071 339 aa18.56■□□□□ 0.56
MBD1-203ENST00000339998 TPRNQ4KMQ1 711 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms