RNA–Protein interactions for RNA: ENST00000337665.8

ARHGEF1-201, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-201ENST00000337665 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 TAF5LO75529 589 aa17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 F13A1P00488 732 aa17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
ARHGEF1-201ENST00000337665 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.36
ARHGEF1-201ENST00000337665 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
ARHGEF1-201ENST00000337665 LAMA4Q16363 1823 aa17.27■□□□□ 0.36
ARHGEF1-201ENST00000337665 GJB2P29033 226 aa17.27■□□□□ 0.35
ARHGEF1-201ENST00000337665 PSMA5P28066 241 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 HAUS7Q99871 368 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 MTMR6Q9Y217 621 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 ZNF609O15014 1411 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 TTLL7Q6ZT98 887 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 ATG9AQ7Z3C6 839 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 HMG20BQ9P0W2 317 aa17.26■□□□□ 0.35
ARHGEF1-201ENST00000337665 HSPA2P54652 639 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 DBNDD2Q9BQY9 259 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 PRDM11Q9NQV5 511 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 SPEF2Q9C093 1822 aa17.25■□□□□ 0.35
ARHGEF1-201ENST00000337665 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 SYAP1Q96A49 352 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 TOB2Q14106 344 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 HS1BP3Q53T59 392 aa17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 KCNJ4P48050 445 aa17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 GPR108Q9NPR9 543 aa17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 CWC25Q9NXE8 425 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF1-201ENST00000337665 A1BGP04217 495 aa17.23■□□□□ 0.35
ARHGEF1-201ENST00000337665 ATP6V1DQ9Y5K8 247 aa17.23■□□□□ 0.35
ARHGEF1-201ENST00000337665 PALLDQ8WX93 1383 aa17.23■□□□□ 0.35
ARHGEF1-201ENST00000337665 IL2RBP14784 551 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 ANKRD1Q15327 319 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 BLOC1S2Q6QNY1 142 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 UBE2HP62256 183 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 NDUFB9Q9Y6M9 179 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
ARHGEF1-201ENST00000337665 ITGB4P16144 1822 aa17.21■□□□□ 0.35
ARHGEF1-201ENST00000337665 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
ARHGEF1-201ENST00000337665 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
ARHGEF1-201ENST00000337665 ZSCAN30Q86W11 494 aa17.21■□□□□ 0.35
ARHGEF1-201ENST00000337665 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
ARHGEF1-201ENST00000337665 PHF14O94880 888 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 CHGBP05060 677 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 CCDC183Q5T5S1 534 aa17.2■□□□□ 0.34
ARHGEF1-201ENST00000337665 DTNBO60941 627 aa17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 KRT32Q14532 448 aa17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 CIAO1O76071 339 aa17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
ARHGEF1-201ENST00000337665 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 CCDC129Q6ZRS4 1044 aa17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 U3KPZ7 1027 aaPredicted RBP17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 TCEANC2Q96MN5 208 aa17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.18■□□□□ 0.34
ARHGEF1-201ENST00000337665 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 EYA2O00167 538 aa17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 DDX46Q7L014 1031 aaKnown RBP17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 LETM1O95202 739 aaPredicted RBP17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 LRRC24Q50LG9 513 aa17.17■□□□□ 0.34
ARHGEF1-201ENST00000337665 CYP21A2P08686 494 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 NEK1Q96PY6 1258 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 NOL7Q9UMY1 257 aaKnown RBP17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 ANKRD36CQ5JPF3 1778 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 FIBPO43427 364 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 TIMM10P62072 90 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 CDC37L1Q7L3B6 337 aa17.16■□□□□ 0.34
ARHGEF1-201ENST00000337665 PDCP20941 246 aa17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 TRIM28Q13263 835 aaKnown RBP17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 FUCA2Q9BTY2 467 aa17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 RNF214Q8ND24 703 aa17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 UBE2Q2Q8WVN8 375 aa17.15■□□□□ 0.34
ARHGEF1-201ENST00000337665 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms