RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 CEBPZQ03701 1054 aaKnown RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 SLC9C2Q5TAH2 1124 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 SMC5Q8IY18 1101 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 TMTC2Q8N394 836 aa13.14□□□□□ -0.31
POLR1B-202ENST00000333990 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-202ENST00000333990 NEK1Q96PY6 1258 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 KRT23Q9C075 422 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 PAG1Q9NWQ8 432 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 TNIP1Q15025 636 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 INO80Q9ULG1 1556 aaPredicted RBP13.13□□□□□ -0.31
POLR1B-202ENST00000333990 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 RLBP1P12271 317 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 SDSP20132 328 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
POLR1B-202ENST00000333990 CCDC83Q8IWF9 413 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 SPATA32Q96LK8 384 aa13.13□□□□□ -0.31
POLR1B-202ENST00000333990 USP19O94966 1318 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 TRAK2O60296 914 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 MCM5P33992 734 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 TCIRG1Q13488 830 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 GCKRQ14397 625 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 TMEM132AQ24JP5 1023 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 FILIP1LQ4L180 1135 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 ESR2Q92731 530 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 DDX11Q96FC9 970 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 C8orf76Q96K31 380 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 TMEM67Q5HYA8 995 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 CUL5Q93034 780 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 EHMT1Q9H9B1 1298 aa13.12□□□□□ -0.31
POLR1B-202ENST00000333990 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
POLR1B-202ENST00000333990 OFD1O75665 1012 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 ITGA6P23229 1130 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 CDK12Q9NYV4 1490 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-202ENST00000333990 RXRBP28702 533 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 RTN4Q9NQC3 1192 aaKnown RBP13.11□□□□□ -0.31
POLR1B-202ENST00000333990 ARHGEF40Q8TER5 1519 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 H0YIN7 160 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 ANAPC15P60006 121 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 MAGEC2Q9UBF1 373 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-202ENST00000333990 SLC4A4Q9Y6R1 1079 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 SIK1P57059 783 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 TSHZ3Q63HK5 1081 aa13.11□□□□□ -0.31
POLR1B-202ENST00000333990 HELBQ8NG08 1087 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-202ENST00000333990 CAMSAP1Q5T5Y3 1602 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 HCLS1P14317 486 aaPredicted RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 SSRP1Q08945 709 aaKnown RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 TFCP2Q12800 502 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 PUM3Q15397 648 aaKnown RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 CAVIN1Q6NZI2 390 aaKnown RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 RAD50Q92878 1312 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 CEP152O94986 1710 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
POLR1B-202ENST00000333990 GNAQP50148 359 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 DIP2BQ9P265 1576 aa13.1□□□□□ -0.31
POLR1B-202ENST00000333990 NF2P35240 595 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 HAND2P61296 217 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 MAGEB6P1A0A0J9YX57 407 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 RNF113AO15541 343 aaKnown RBP13.09□□□□□ -0.31
POLR1B-202ENST00000333990 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 GGA1Q9UJY5 639 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 USP16Q9Y5T5 823 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 CCDC192P0DO97 292 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
POLR1B-202ENST00000333990 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.31
POLR1B-202ENST00000333990 WTAPQ15007 396 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 TNNQ9UQP3 1299 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 MAST3O60307 1309 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 CCDC70Q6NSX1 233 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 LAMC1P11047 1609 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 HIBADHP31937 336 aaKnown RBP13.08□□□□□ -0.32
POLR1B-202ENST00000333990 IL6STP40189 918 aaPredicted RBP13.08□□□□□ -0.32
POLR1B-202ENST00000333990 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
POLR1B-202ENST00000333990 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
POLR1B-202ENST00000333990 UFL1O94874 794 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 MRE11P49959 708 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 DHX8Q14562 1220 aaKnown RBP13.07□□□□□ -0.32
POLR1B-202ENST00000333990 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 TULP4Q9NRJ4 1543 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 TSPY3P0CV98 308 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 TSPY8P0CW00 308 aa13.07□□□□□ -0.32
POLR1B-202ENST00000333990 METAP2P50579 478 aaKnown RBP eCLIP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms