RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.31
SNX20-202ENST00000330943 FSD1Q9BTV5 496 aa17.02■□□□□ 0.31
SNX20-202ENST00000330943 CCDC8Q9H0W5 538 aaPredicted RBP17.02■□□□□ 0.31
SNX20-202ENST00000330943 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
SNX20-202ENST00000330943 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
SNX20-202ENST00000330943 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
SNX20-202ENST00000330943 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
SNX20-202ENST00000330943 BRF1Q92994 677 aa17.01■□□□□ 0.31
SNX20-202ENST00000330943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
SNX20-202ENST00000330943 MORC2Q9Y6X9 1032 aaPredicted RBP17.01■□□□□ 0.31
SNX20-202ENST00000330943 KCNQ3O43525 872 aa17■□□□□ 0.31
SNX20-202ENST00000330943 IQCB1Q15051 598 aa17■□□□□ 0.31
SNX20-202ENST00000330943 BOLA2Q9H3K6 86 aa17■□□□□ 0.31
SNX20-202ENST00000330943 H3BQV1 296 aa17■□□□□ 0.31
SNX20-202ENST00000330943 SKILP12757 684 aa17■□□□□ 0.31
SNX20-202ENST00000330943 IFFO2Q5TF58 517 aa17■□□□□ 0.31
SNX20-202ENST00000330943 FILIP1Q7Z7B0 1213 aa17■□□□□ 0.31
SNX20-202ENST00000330943 ABTB2Q8N961 1025 aa17■□□□□ 0.31
SNX20-202ENST00000330943 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
SNX20-202ENST00000330943 TLR7Q9NYK1 1049 aaKnown RBP17■□□□□ 0.31
SNX20-202ENST00000330943 NWD1Q149M9 1564 aa17■□□□□ 0.31
SNX20-202ENST00000330943 RESTQ13127 1097 aa17■□□□□ 0.31
SNX20-202ENST00000330943 KMT5BQ4FZB7 885 aa17■□□□□ 0.31
SNX20-202ENST00000330943 ZNF397Q8NF99 534 aaPredicted RBP17■□□□□ 0.31
SNX20-202ENST00000330943 EAF2Q96CJ1 260 aaPredicted RBP17■□□□□ 0.31
SNX20-202ENST00000330943 USP16Q9Y5T5 823 aa17■□□□□ 0.31
SNX20-202ENST00000330943 CAVIN2O95810 425 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 SLFN14P0C7P3 912 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
SNX20-202ENST00000330943 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
SNX20-202ENST00000330943 SARM1Q6SZW1 724 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 MRFAP1L1Q96HT8 127 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 PIK3C2AO00443 1686 aa16.99■□□□□ 0.31
SNX20-202ENST00000330943 BECN2A8MW95 431 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SNX20-202ENST00000330943 KRT222Q8N1A0 295 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 A0A087WWV3 80 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 CCDC69A6NI79 296 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 NEMFO60524 1076 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 SASH1O94885 1247 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 STX1AQ16623 288 aa16.98■□□□□ 0.31
SNX20-202ENST00000330943 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
SNX20-202ENST00000330943 HSP90B1P14625 803 aaKnown RBP16.97■□□□□ 0.31
SNX20-202ENST00000330943 FOSBP53539 338 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 ELF2Q15723 593 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 NYAP1Q6ZVC0 841 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 GTF3C6Q969F1 213 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
SNX20-202ENST00000330943 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX20-202ENST00000330943 TAF3Q5VWG9 929 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 SIL1Q9H173 461 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
SNX20-202ENST00000330943 HOXB7P09629 217 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
SNX20-202ENST00000330943 CEMIPQ8WUJ3 1361 aa16.96■□□□□ 0.31
SNX20-202ENST00000330943 FTOQ9C0B1 505 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX20-202ENST00000330943 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
SNX20-202ENST00000330943 UBR1Q8IWV7 1749 aa16.96■□□□□ 0.31
SNX20-202ENST00000330943 CCZ1BP86790 482 aa16.96■□□□□ 0.3
SNX20-202ENST00000330943 CCZ1P86791 482 aaPredicted RBP16.96■□□□□ 0.3
SNX20-202ENST00000330943 FBXO38Q6PIJ6 1188 aa16.96■□□□□ 0.3
SNX20-202ENST00000330943 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.3
SNX20-202ENST00000330943 TERF2Q15554 542 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
SNX20-202ENST00000330943 NPHP1O15259 732 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 ALDH1L1O75891 902 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 ESCO1Q5FWF5 840 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 FBXW7Q969H0 707 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 ERO1AQ96HE7 468 aa16.95■□□□□ 0.3
SNX20-202ENST00000330943 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
SNX20-202ENST00000330943 TEFQ10587 303 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 PROSER3Q2NL68 480 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 Q6ZUG5 572 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 SUCLG2Q96I99 432 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 GOLPH3LQ9H4A5 285 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
SNX20-202ENST00000330943 PLEKHG1Q9ULL1 1385 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 RGPD8O14715 1765 aaPredicted RBP16.94■□□□□ 0.3
SNX20-202ENST00000330943 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
SNX20-202ENST00000330943 NEK1Q96PY6 1258 aa16.94■□□□□ 0.3
SNX20-202ENST00000330943 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
SNX20-202ENST00000330943 CTAGE5O15320 804 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 TAF5LO75529 589 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 CCDC73Q6ZRK6 1079 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 DHX40Q8IX18 779 aaKnown RBP16.93■□□□□ 0.3
SNX20-202ENST00000330943 LRRC2Q9BYS8 371 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 AOPEPQ8N6M6 819 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
SNX20-202ENST00000330943 KINO60870 393 aaKnown RBP16.93■□□□□ 0.3
SNX20-202ENST00000330943 SLU7O95391 586 aaKnown RBP16.93■□□□□ 0.3
SNX20-202ENST00000330943 KRT32Q14532 448 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 TSGA10IPQ3SY00 556 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
SNX20-202ENST00000330943 FGD1P98174 961 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms