RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 RANBP6O60518 1105 aaKnown RBP18.9■□□□□ 0.62
SYNM-201ENST00000328642 IL15P40933 162 aaPredicted RBP18.9■□□□□ 0.62
SYNM-201ENST00000328642 SYNE4Q8N205 404 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 CCDC69A6NI79 296 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 APOBRQ0VD83 1088 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 SART3Q15020 963 aaKnown RBP18.9■□□□□ 0.62
SYNM-201ENST00000328642 EPHA10Q5JZY3 1008 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 USP48Q86UV5 1035 aa18.9■□□□□ 0.62
SYNM-201ENST00000328642 GNL3LQ9NVN8 582 aaKnown RBP18.9■□□□□ 0.62
SYNM-201ENST00000328642 USP25Q9UHP3 1055 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 SETBP1Q9Y6X0 1596 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 A0A0D9SFI3 127 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 MCMDC2Q4G0Z9 681 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 CTNNA3Q9UI47 895 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 MYO3AQ8NEV4 1616 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 BRINP3Q76B58 766 aa18.89■□□□□ 0.61
SYNM-201ENST00000328642 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
SYNM-201ENST00000328642 HOXB7P09629 217 aa18.88■□□□□ 0.61
SYNM-201ENST00000328642 FAM13BQ9NYF5 915 aa18.88■□□□□ 0.61
SYNM-201ENST00000328642 CCDC171Q6TFL3 1326 aa18.88■□□□□ 0.61
SYNM-201ENST00000328642 SNAP23O00161 211 aa18.88■□□□□ 0.61
SYNM-201ENST00000328642 UBAC1Q9BSL1 405 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
SYNM-201ENST00000328642 ITGA6P23229 1130 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 ZSCAN23Q3MJ62 389 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 AMOTL1Q8IY63 956 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 MROH1Q8NDA8 1641 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 CLSTN1O94985 981 aa18.87■□□□□ 0.61
SYNM-201ENST00000328642 TPD52L1Q16890 204 aaPredicted RBP18.87■□□□□ 0.61
SYNM-201ENST00000328642 TTC41PQ6P2S7 1318 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 ESPNB1AK53 854 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 SYT1P21579 422 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
SYNM-201ENST00000328642 MAP3K12Q12852 859 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 ADCK5Q3MIX3 580 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 EYA2O00167 538 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 IFIT3O14879 490 aaKnown RBP18.86■□□□□ 0.61
SYNM-201ENST00000328642 CDK11BP21127 795 aaKnown RBP18.86■□□□□ 0.61
SYNM-201ENST00000328642 SMIM5Q71RC9 77 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 SLC5A1P13866 664 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
SYNM-201ENST00000328642 BIN1O00499 593 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 TPM4P67936 248 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 PI16Q6UXB8 463 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
SYNM-201ENST00000328642 BABAM1Q9NWV8 329 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 NRXN1Q9ULB1 1477 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 KLF18A0A0U1RQI7 1052 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 ZNF652Q9Y2D9 606 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 ZSCAN25Q6NSZ9 544 aa18.85■□□□□ 0.61
SYNM-201ENST00000328642 ZNF830Q96NB3 372 aaPredicted RBP18.85■□□□□ 0.61
SYNM-201ENST00000328642 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
SYNM-201ENST00000328642 IBTKQ9P2D0 1353 aaPredicted RBP18.85■□□□□ 0.61
SYNM-201ENST00000328642 ZSCAN22P10073 491 aaPredicted RBP18.84■□□□□ 0.61
SYNM-201ENST00000328642 TTLL5Q6EMB2 1281 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 FILIP1Q7Z7B0 1213 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 C8orf76Q96K31 380 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 CHGBP05060 677 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 KLHL40Q2TBA0 621 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 ZBTB1Q9Y2K1 713 aa18.84■□□□□ 0.61
SYNM-201ENST00000328642 CAVIN4Q5BKX8 364 aa18.83■□□□□ 0.61
SYNM-201ENST00000328642 ORC3Q9UBD5 711 aaPredicted RBP18.83■□□□□ 0.61
SYNM-201ENST00000328642 XAGE2Q96GT9 111 aa18.83■□□□□ 0.61
SYNM-201ENST00000328642 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
SYNM-201ENST00000328642 DBNLQ9UJU6 430 aaKnown RBP18.83■□□□□ 0.6
SYNM-201ENST00000328642 SLC27A2O14975 620 aa18.83■□□□□ 0.6
SYNM-201ENST00000328642 CCDC192P0DO97 292 aa18.83■□□□□ 0.6
SYNM-201ENST00000328642 RBM5P52756 815 aaKnown RBP eCLIP18.83■□□□□ 0.6
SYNM-201ENST00000328642 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 TOM1O60784 492 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 SASH1O94885 1247 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 C6orf229H3BNL8 230 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 GADD45BO75293 160 aaPredicted RBP18.82■□□□□ 0.6
SYNM-201ENST00000328642 ZAP70P43403 619 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 ANAPC15P60006 121 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 LAMC1P11047 1609 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 JAK2O60674 1132 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 CD163L1Q9NR16 1453 aa18.82■□□□□ 0.6
SYNM-201ENST00000328642 SMC2O95347 1197 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 IKQ13123 557 aaPredicted RBP18.81■□□□□ 0.6
SYNM-201ENST00000328642 F8W031 263 aaPredicted RBP18.81■□□□□ 0.6
SYNM-201ENST00000328642 ADORA1P30542 326 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 CCAR2Q8N163 923 aaKnown RBP18.81■□□□□ 0.6
SYNM-201ENST00000328642 ANTXR1Q9H6X2 564 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 RFC4P35249 363 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 RBM10P98175 930 aaKnown RBP18.81■□□□□ 0.6
SYNM-201ENST00000328642 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 ZNF396Q96N95 335 aaPredicted RBP18.81■□□□□ 0.6
SYNM-201ENST00000328642 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
SYNM-201ENST00000328642 CYP7A1P22680 504 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 MAGEB6Q8N7X4 407 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 RAD50Q92878 1312 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 CCDC173Q0VFZ6 552 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 TMEM67Q5HYA8 995 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 RUFY3Q7L099 469 aa18.8■□□□□ 0.6
SYNM-201ENST00000328642 PDILTQ8N807 584 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms