RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 RASAL2Q9UJF2 1139 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
SMAD3-201ENST00000327367 ZFYP08048 801 aaPredicted RBP18.76■□□□□ 0.59
SMAD3-201ENST00000327367 WIZO95785 1651 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 TACC1O75410 805 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 INPP5BP32019 993 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 TXNDC2Q86VQ3 553 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 CEP120Q8N960 986 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 ATP11AP98196 1134 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 CCDC196A0A1B0GTZ2 297 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
SMAD3-201ENST00000327367 CEP85LQ5SZL2 805 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 SYCP3Q8IZU3 236 aa18.75■□□□□ 0.59
SMAD3-201ENST00000327367 IFI16Q16666 785 aaKnown RBP18.74■□□□□ 0.59
SMAD3-201ENST00000327367 ZWINTO95229 277 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 RBSNQ9H1K0 784 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 TMEM67Q5HYA8 995 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 NEK1Q96PY6 1258 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 STIM2Q9P246 746 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 RFC1P35251 1148 aaPredicted RBP18.74■□□□□ 0.59
SMAD3-201ENST00000327367 ANAPC4Q9UJX5 808 aa18.74■□□□□ 0.59
SMAD3-201ENST00000327367 STMN2Q93045 179 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 METAP2P50579 478 aaKnown RBP eCLIP18.73■□□□□ 0.59
SMAD3-201ENST00000327367 PPP1R1BQ9UD71 204 aaPredicted RBP18.73■□□□□ 0.59
SMAD3-201ENST00000327367 ANKRD50Q9ULJ7 1429 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 FRMD3A2A2Y4 597 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 KIF3CO14782 793 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
SMAD3-201ENST00000327367 GOLIM4O00461 696 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 DIXDC1Q155Q3 683 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 MRRFQ96E11 262 aaKnown RBP18.73■□□□□ 0.59
SMAD3-201ENST00000327367 TAF7Q15545 349 aaPredicted RBP18.73■□□□□ 0.59
SMAD3-201ENST00000327367 TCP11L1Q9NUJ3 509 aa18.73■□□□□ 0.59
SMAD3-201ENST00000327367 RAB34Q9BZG1 259 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 RNASE9P60153 205 aaKnown RBP18.72■□□□□ 0.59
SMAD3-201ENST00000327367 SETDB1Q15047 1291 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
SMAD3-201ENST00000327367 PPFIBP2Q8ND30 876 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 TNIP1Q15025 636 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 NDUFAB1O14561 156 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 ATF3P18847 181 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 UBA7P41226 1012 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 AMPD3Q01432 767 aa18.72■□□□□ 0.59
SMAD3-201ENST00000327367 F13A1P00488 732 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 ACTN2P35609 894 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 INTS8Q75QN2 995 aaKnown RBP18.71■□□□□ 0.59
SMAD3-201ENST00000327367 RAB3IL1Q8TBN0 382 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 SNRKQ9NRH2 765 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 STMN4Q9H169 189 aaPredicted RBP18.71■□□□□ 0.59
SMAD3-201ENST00000327367 ZC3H6P61129 1189 aaKnown RBP18.71■□□□□ 0.59
SMAD3-201ENST00000327367 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 SPAG5Q96R06 1193 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 BRF1Q92994 677 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 TTC14Q96N46 770 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 MAP7D1Q3KQU3 841 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 KANK3Q6NY19 840 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 CATIPQ7Z7H3 387 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 MRPS27Q92552 414 aaKnown RBP18.71■□□□□ 0.59
SMAD3-201ENST00000327367 CTAGE1Q96RT6 745 aa18.71■□□□□ 0.59
SMAD3-201ENST00000327367 A0A087WZG4 1122 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 UBXN1Q04323 297 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 CCDC50Q8IVM0 306 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 KIF20AO95235 890 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 LMNTD2Q8IXW0 634 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 CETN1Q12798 172 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 DHX58Q96C10 678 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 TACO1Q9BSH4 297 aaKnown RBP18.7■□□□□ 0.58
SMAD3-201ENST00000327367 MAP2K2P36507 400 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
SMAD3-201ENST00000327367 KIF5AQ12840 1032 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 SDSP20132 328 aa18.7■□□□□ 0.58
SMAD3-201ENST00000327367 CAVIN2O95810 425 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 OAS2P29728 719 aaKnown RBP18.69■□□□□ 0.58
SMAD3-201ENST00000327367 STAT6P42226 847 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 EVI5LQ96CN4 794 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 TBC1D5Q92609 795 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 CCDC77Q9BR77 488 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 MRVI1Q9Y6F6 885 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 NSD3Q9BZ95 1437 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 IQCA1Q86XH1 822 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 ZSCAN16Q9H4T2 348 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-201ENST00000327367 ERCC5P28715 1186 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-201ENST00000327367 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
SMAD3-201ENST00000327367 BANK1Q8NDB2 785 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 CARD6Q9BX69 1037 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 PPP4R3AQ6IN85 833 aa18.69■□□□□ 0.58
SMAD3-201ENST00000327367 PRDM2Q13029 1718 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 ERO1AQ96HE7 468 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 FCHSD2O94868 740 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 KRT86O43790 486 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 CIB2O75838 187 aa18.68■□□□□ 0.58
SMAD3-201ENST00000327367 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
SMAD3-201ENST00000327367 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms