RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 GOPCQ9HD26 462 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 STX1AQ16623 288 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 UVSSAQ2YD98 709 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 CAVIN4Q5BKX8 364 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 ZNF76P36508 570 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 PRAM1Q96QH2 718 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 CDK19Q9BWU1 502 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 SLC8A1P32418 973 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 JAKMIP1Q96N16 626 aaKnown RBP11.07□□□□□ -0.64
COL12A1-201ENST00000322507 TTC12Q9H892 705 aaPredicted RBP11.07□□□□□ -0.64
COL12A1-201ENST00000322507 MX1P20591 662 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 IRX4P78413 519 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
COL12A1-201ENST00000322507 KIF4AO95239 1232 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 SMARCC2Q8TAQ2 1214 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 SRRTQ9BXP5 876 aaKnown RBP11.06□□□□□ -0.64
COL12A1-201ENST00000322507 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 FSD2A1L4K1 749 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 ZSCAN16Q9H4T2 348 aaPredicted RBP11.06□□□□□ -0.64
COL12A1-201ENST00000322507 HSP90AA5PQ58FG0 334 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 ESCO1Q5FWF5 840 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 MAP3K12Q12852 859 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 MRFAP1L1Q96HT8 127 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 TRPC3Q13507 836 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 NBPF11Q86T75 865 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 TXNDC2Q86VQ3 553 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 BICDL2A1A5D9 508 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 TOP1P11387 765 aaKnown RBP11.06□□□□□ -0.64
COL12A1-201ENST00000322507 CACNA2D4Q7Z3S7 1137 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 LRP2BPQ9P2M1 347 aa11.06□□□□□ -0.64
COL12A1-201ENST00000322507 IL16Q14005 1332 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 CAPN2P17655 700 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 SF3B2Q13435 895 aaKnown RBP11.05□□□□□ -0.64
COL12A1-201ENST00000322507 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-201ENST00000322507 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 MYH10P35580 1976 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 PPP1R9BQ96SB3 815 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 TRIM7Q9C029 511 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 ATP2B1P20020 1258 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 FKBP4Q02790 459 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL12A1-201ENST00000322507 CUL5Q93034 780 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 C16orf45Q96MC5 204 aaPredicted RBP11.05□□□□□ -0.64
COL12A1-201ENST00000322507 KIF4BQ2VIQ3 1234 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 CCDC113Q9H0I3 377 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 CKAP4Q07065 602 aaKnown RBP11.05□□□□□ -0.64
COL12A1-201ENST00000322507 C8orf76Q96K31 380 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 NUF2Q9BZD4 464 aa11.05□□□□□ -0.64
COL12A1-201ENST00000322507 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 PALMDQ9NP74 551 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 TTC36A6NLP5 189 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 CNGA1P29973 690 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 ZNF280CQ8ND82 737 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 PIK3R5Q8WYR1 880 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 PDCD2Q16342 344 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 ZHX3Q9H4I2 956 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 ABCA10Q8WWZ4 1543 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 TPD52P55327 224 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 DTNBP1Q96EV8 351 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 CATIPQ7Z7H3 387 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 NBPF4Q96M43 638 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 TACO1Q9BSH4 297 aaKnown RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 APLFQ8IW19 511 aaPredicted RBP11.04□□□□□ -0.64
COL12A1-201ENST00000322507 NAPBQ9H115 298 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 MXRA7P84157 204 aa11.04□□□□□ -0.64
COL12A1-201ENST00000322507 ATP2A3Q93084 1043 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 PCYT1AP49585 367 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 ARHGAP24Q8N264 748 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 INF2Q27J81 1249 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 NBPF8Q3BBV2 869 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 TCP11L1Q9NUJ3 509 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 CWC27Q6UX04 472 aaKnown RBP11.03□□□□□ -0.64
COL12A1-201ENST00000322507 SCAF11Q99590 1463 aaKnown RBP11.03□□□□□ -0.64
COL12A1-201ENST00000322507 CTAGE9A4FU28 777 aa11.03□□□□□ -0.64
COL12A1-201ENST00000322507 GSTTP1A0A1W2PQM5 241 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 BMP2KLQ5H9B9 411 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 CLCN1P35523 988 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 MAN1A2O60476 641 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 BAG4O95429 457 aaKnown RBP11.02□□□□□ -0.64
COL12A1-201ENST00000322507 SPTY2D1Q68D10 685 aaPredicted RBP11.02□□□□□ -0.64
COL12A1-201ENST00000322507 CALML4Q96GE6 196 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 CCDC68Q9H2F9 335 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 SAMD15Q9P1V8 674 aa11.02□□□□□ -0.64
COL12A1-201ENST00000322507 TMPOP42166 694 aaKnown RBP11.02□□□□□ -0.65
COL12A1-201ENST00000322507 UBE2HP62256 183 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms