RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 KIAA2012Q0VF49 1180 aa25.9■■□□□ 1.74
SSNA1-201ENST00000322310 LRP10Q7Z4F1 713 aa25.9■■□□□ 1.74
SSNA1-201ENST00000322310 ZIC5Q96T25 663 aa25.9■■□□□ 1.74
SSNA1-201ENST00000322310 ERBB4Q15303 1308 aa25.89■■□□□ 1.74
SSNA1-201ENST00000322310 CDHR2Q9BYE9 1310 aa25.89■■□□□ 1.74
SSNA1-201ENST00000322310 CASP8AP2Q9UKL3 1982 aa25.89■■□□□ 1.74
SSNA1-201ENST00000322310 MPNDQ8N594 471 aa25.89■■□□□ 1.74
SSNA1-201ENST00000322310 ANXA1P04083 346 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 DGKZQ13574 1117 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 PDIA6Q15084 440 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 NFE2L2Q16236 605 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 PROSER3Q2NL68 480 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 DLK2Q6UY11 383 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 SP8Q8IXZ3 490 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 ZC3H15Q8WU90 426 aaKnown RBP25.88■■□□□ 1.73
SSNA1-201ENST00000322310 PLEKHF1Q96S99 279 aa25.88■■□□□ 1.73
SSNA1-201ENST00000322310 BBOX1O75936 387 aa25.87■■□□□ 1.73
SSNA1-201ENST00000322310 HCLS1P14317 486 aaPredicted RBP25.87■■□□□ 1.73
SSNA1-201ENST00000322310 TNIP1Q15025 636 aa25.87■■□□□ 1.73
SSNA1-201ENST00000322310 CDC37L1Q7L3B6 337 aa25.87■■□□□ 1.73
SSNA1-201ENST00000322310 CNOT7Q9UIV1 285 aaKnown RBP25.87■■□□□ 1.73
SSNA1-201ENST00000322310 LAMB2P55268 1798 aa25.87■■□□□ 1.73
SSNA1-201ENST00000322310 YDJCA8MPS7 323 aa25.86■■□□□ 1.73
SSNA1-201ENST00000322310 EIF2S2P20042 333 aaKnown RBP25.86■■□□□ 1.73
SSNA1-201ENST00000322310 USP48Q86UV5 1035 aa25.85■■□□□ 1.73
SSNA1-201ENST00000322310 HUNKP57058 714 aa25.84■■□□□ 1.73
SSNA1-201ENST00000322310 NOGQ13253 232 aa25.84■■□□□ 1.73
SSNA1-201ENST00000322310 DUOX1Q9NRD9 1551 aa25.84■■□□□ 1.73
SSNA1-201ENST00000322310 TSPYL4Q9UJ04 414 aa25.84■■□□□ 1.73
SSNA1-201ENST00000322310 DDX46Q7L014 1031 aaKnown RBP25.83■■□□□ 1.73
SSNA1-201ENST00000322310 NLRP10Q86W26 655 aa25.83■■□□□ 1.73
SSNA1-201ENST00000322310 MICALL2Q8IY33 904 aa25.83■■□□□ 1.73
SSNA1-201ENST00000322310 ZBTB12Q9Y330 459 aaPredicted RBP25.83■■□□□ 1.73
SSNA1-201ENST00000322310 TNRC18O15417 2968 aaPredicted RBP25.82■■□□□ 1.72
SSNA1-201ENST00000322310 H7C1D1 291 aa25.82■■□□□ 1.72
SSNA1-201ENST00000322310 GRAPQ13588 217 aa25.82■■□□□ 1.72
SSNA1-201ENST00000322310 GRAPLQ8TC17 118 aaPredicted RBP25.82■■□□□ 1.72
SSNA1-201ENST00000322310 ZNF428Q96B54 188 aa25.82■■□□□ 1.72
SSNA1-201ENST00000322310 ANKRD36CQ5JPF3 1778 aa25.82■■□□□ 1.72
SSNA1-201ENST00000322310 SAMD7Q7Z3H4 446 aa25.81■■□□□ 1.72
SSNA1-201ENST00000322310 AIMP1Q12904 312 aaKnown RBP25.8■■□□□ 1.72
SSNA1-201ENST00000322310 NECTIN2Q92692 538 aa25.8■■□□□ 1.72
SSNA1-201ENST00000322310 TRMT112Q9UI30 125 aaKnown RBP25.8■■□□□ 1.72
SSNA1-201ENST00000322310 TAF1P21675 1872 aa25.8■■□□□ 1.72
SSNA1-201ENST00000322310 EGFRP00533 1210 aa25.79■■□□□ 1.72
SSNA1-201ENST00000322310 COPS6Q7L5N1 327 aa25.79■■□□□ 1.72
SSNA1-201ENST00000322310 MAPK8IP3Q9UPT6 1336 aa25.79■■□□□ 1.72
SSNA1-201ENST00000322310 FAM155AB1AL88 458 aaPredicted RBP25.78■■□□□ 1.72
SSNA1-201ENST00000322310 TBC1D10BQ4KMP7 808 aaPredicted RBP25.78■■□□□ 1.72
SSNA1-201ENST00000322310 XAGE3Q8WTP9 111 aa25.78■■□□□ 1.72
SSNA1-201ENST00000322310 PSMD14O00487 310 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 HSP90AB3PQ58FF7 597 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 KRT26Q7Z3Y9 468 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 DBNDD1Q9H9R9 158 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 SH3TC1Q8TE82 1336 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 LRRC37AA6NMS7 1700 aa25.77■■□□□ 1.72
SSNA1-201ENST00000322310 ADM5C9JUS6 153 aa25.76■■□□□ 1.71
SSNA1-201ENST00000322310 RGMBQ6NW40 437 aa25.76■■□□□ 1.71
SSNA1-201ENST00000322310 DPF2Q92785 391 aa25.76■■□□□ 1.71
SSNA1-201ENST00000322310 TCIRG1Q13488 830 aa25.75■■□□□ 1.71
SSNA1-201ENST00000322310 WASHC4Q2M389 1173 aa25.75■■□□□ 1.71
SSNA1-201ENST00000322310 GBA2Q9HCG7 927 aaPredicted RBP25.75■■□□□ 1.71
SSNA1-201ENST00000322310 RIMBP2O15034 1052 aa25.74■■□□□ 1.71
SSNA1-201ENST00000322310 RBM26Q5T8P6 1007 aaKnown RBP25.74■■□□□ 1.71
SSNA1-201ENST00000322310 KCNQ5Q9NR82 932 aa25.74■■□□□ 1.71
SSNA1-201ENST00000322310 NSFL1CQ9UNZ2 370 aaKnown RBP25.74■■□□□ 1.71
SSNA1-201ENST00000322310 KIF23Q02241 960 aaPredicted RBP25.73■■□□□ 1.71
SSNA1-201ENST00000322310 TMC4Q7Z404 712 aa25.73■■□□□ 1.71
SSNA1-201ENST00000322310 COL4A1P02462 1669 aa25.72■■□□□ 1.71
SSNA1-201ENST00000322310 SOX10P56693 466 aa25.72■■□□□ 1.71
SSNA1-201ENST00000322310 C2orf69Q8N8R5 385 aa25.72■■□□□ 1.71
SSNA1-201ENST00000322310 CELF1Q92879 486 aaKnown RBP25.72■■□□□ 1.71
SSNA1-201ENST00000322310 PCDH10Q9P2E7 1040 aa25.72■■□□□ 1.71
SSNA1-201ENST00000322310 ZNF157P51786 506 aaPredicted RBP25.71■■□□□ 1.71
SSNA1-201ENST00000322310 SAGE1Q9NXZ1 904 aa25.71■■□□□ 1.71
SSNA1-201ENST00000322310 POLLQ9UGP5 575 aa25.71■■□□□ 1.71
SSNA1-201ENST00000322310 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
SSNA1-201ENST00000322310 RTL9Q8NET4 1388 aa25.7■■□□□ 1.71
SSNA1-201ENST00000322310 C6orf229H3BNL8 230 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 ECE2O60344 883 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 TRPA1O75762 1119 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 RIPK4P57078 832 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 DOK7Q18PE1 504 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 CCDC102AQ96A19 550 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 DCPSQ96C86 337 aaKnown RBP25.7■■□□□ 1.7
SSNA1-201ENST00000322310 PNNQ9H307 717 aaKnown RBP25.7■■□□□ 1.7
SSNA1-201ENST00000322310 RNF186Q9NXI6 227 aa25.7■■□□□ 1.7
SSNA1-201ENST00000322310 GPSM2P81274 684 aa25.69■■□□□ 1.7
SSNA1-201ENST00000322310 KRT24Q2M2I5 525 aa25.69■■□□□ 1.7
SSNA1-201ENST00000322310 RPS12P25398 132 aaKnown RBP25.68■■□□□ 1.7
SSNA1-201ENST00000322310 FAM89AQ96GI7 184 aa25.68■■□□□ 1.7
SSNA1-201ENST00000322310 ASTN2O75129 1339 aaPredicted RBP25.67■■□□□ 1.7
SSNA1-201ENST00000322310 BABAM1Q9NWV8 329 aa25.67■■□□□ 1.7
SSNA1-201ENST00000322310 POLR2AP24928 1970 aaKnown RBP25.67■■□□□ 1.7
SSNA1-201ENST00000322310 KIF4BQ2VIQ3 1234 aa25.66■■□□□ 1.7
SSNA1-201ENST00000322310 GGA3Q9NZ52 723 aa25.66■■□□□ 1.7
SSNA1-201ENST00000322310 CHPF2Q9P2E5 772 aa25.66■■□□□ 1.7
SSNA1-201ENST00000322310 SLC10A3P09131 477 aa25.65■■□□□ 1.7
SSNA1-201ENST00000322310 SF3B3Q15393 1217 aaKnown RBP25.65■■□□□ 1.7
SSNA1-201ENST00000322310 RTL5Q5HYW3 569 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms