RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 MARCH10Q8NA82 808 aaPredicted RBP4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 ARHGAP45Q92619 1136 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 HLA-CQ95604 372 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 CCDC9Q9Y3X0 531 aaKnown RBP4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 APAF1O14727 1248 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 HMOX1P09601 288 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 SLC19A1P41440 591 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 SCUBE3Q8IX30 993 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 LTV1Q96GA3 475 aaPredicted RBP4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 PRDM9Q9NQV7 894 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 PTPRCP08575 1304 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 KIF16BQ96L93 1317 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 NUP98P52948 1817 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 MYH3P11055 1940 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 PKDCCQ504Y2 493 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 METTL3Q86U44 580 aaKnown RBP4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 TTC5Q8N0Z6 440 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 PHACTR3Q96KR7 559 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 HDAC5Q9UQL6 1122 aa4.24□□□□□ -1.73
SCAMP1-201ENST00000320280 DDX60Q8IY21 1712 aaKnown RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 ZBTB7CA1YPR0 619 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 SNRPA1P09661 255 aaKnown RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 ERICH6BQ5W0A0 696 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 IL17REQ8NFR9 667 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 PALLDQ8WX93 1383 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 GNPATO15228 680 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 BAG6P46379 1132 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 MDM2Q00987 491 aaPredicted RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 ZNF790Q6PG37 636 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 POTEAQ6S8J7 498 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 FCF1Q9Y324 198 aaKnown RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 BTBD11A6QL63 1104 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 HSP90B1P14625 803 aaKnown RBP4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 HIC1Q14526 733 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 CCDC30Q5VVM6 783 aa4.23□□□□□ -1.73
SCAMP1-201ENST00000320280 ST8SIA5O15466 376 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 STARD3NLO95772 234 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 EIF4A1P60842 406 aaKnown RBP4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SF3B2Q13435 895 aaKnown RBP4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 CCDC184Q52MB2 194 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 ZNF697Q5TEC3 545 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 FAM9BQ8IZU0 186 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SPSB2Q99619 263 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SLC6A16Q9GZN6 736 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 HYPKQ9NX55 129 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 FANCIQ9NVI1 1328 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 FBLN1P23142 703 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SSFA2P28290 1259 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 IL6STP40189 918 aaPredicted RBP4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 HSP90AB3PQ58FF7 597 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 DUSP27Q5VZP5 1158 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 USHBP1Q8N6Y0 703 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 PXYLP1Q8TE99 480 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SLC16A10Q8TF71 515 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 TSPYL4Q9UJ04 414 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 ERVV-1B6SEH8 477 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 SMYD5Q6GMV2 418 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 AK7Q96M32 723 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 PHOX2BQ99453 314 aa4.22□□□□□ -1.73
SCAMP1-201ENST00000320280 MYH14Q7Z406 1995 aaKnown RBP4.21□□□□□ -1.73
SCAMP1-201ENST00000320280 IPO8O15397 1037 aaKnown RBP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 GUCA2AQ02747 115 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 PLA2G2CQ5R387 149 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 SYMPKQ92797 1274 aaKnown RBP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 LRRC37AA6NMS7 1700 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 DDX58O95786 925 aaKnown RBP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 CENPBP07199 599 aaPredicted RBP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 HNRNPUQ00839 825 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 CLEC4GQ6UXB4 293 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 PIGBQ92521 554 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 DDX21Q9NR30 783 aaKnown RBP eCLIP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 MBIPQ9NS73 344 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 ATG3Q9NT62 314 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 DBF4Q9UBU7 674 aaPredicted RBP4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 DUOX1Q9NRD9 1551 aa4.21□□□□□ -1.74
SCAMP1-201ENST00000320280 GIGYF1O75420 1035 aaPredicted RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 RBM27Q9P2N5 1060 aaKnown RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 SLC27A5Q9Y2P5 690 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 ZNF787Q6DD87 383 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 RNF19BQ6ZMZ0 732 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 STK31Q9BXU1 1019 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 API5Q9BZZ5 524 aaKnown RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 ARIH1Q9Y4X5 557 aaPredicted RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 LOC102724428A0A0B4J2F2 783 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 TULP1O00294 542 aaPredicted RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 LCE2BO14633 110 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 OATP04181 439 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 SIK1P57059 783 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 TRIM28Q13263 835 aaKnown RBP4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 PDE3AQ14432 1141 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 MPRIPQ6WCQ1 1025 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 LIAT1Q6ZQX7 453 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 CCDC146Q8IYE0 955 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 TSC1Q92574 1164 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 PRR14Q9BWN1 585 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 ZNF652Q9Y2D9 606 aa4.2□□□□□ -1.74
SCAMP1-201ENST00000320280 POTECB2RU33 542 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 RPS6KA4O75676 772 aa4.19□□□□□ -1.74
SCAMP1-201ENST00000320280 TTLL12Q14166 644 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms