RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 TMCO5BA8MYB1 307 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 JAK2O60674 1132 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 U2AF2P26368 475 aaKnown RBP eCLIP4.29□□□□□ -1.725e-7■■■□□ 18.1
GEN1-201ENST00000317402 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 ZKSCAN2Q63HK3 967 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 CHADLQ6NUI6 762 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 TSPYL4Q9UJ04 414 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 MAP3K4Q9Y6R4 1608 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 ATF7IPQ6VMQ6 1270 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 GTPBP4Q9BZE4 634 aaKnown RBP4.29□□□□□ -1.72
GEN1-201ENST00000317402 NUCB1Q02818 461 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 MYO5BQ9ULV0 1848 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 TPM4P67936 248 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 TTLL5Q6EMB2 1281 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 CCDC144CPQ8IYA2 1237 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 LRRFIP2Q9Y608 721 aaKnown RBP4.29□□□□□ -1.72
GEN1-201ENST00000317402 SCAF11Q99590 1463 aaKnown RBP4.29□□□□□ -1.72
GEN1-201ENST00000317402 CASP1P29466 404 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 IL13P35225 146 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 AIFM3Q96NN9 605 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 NPATQ14207 1427 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 DIP2AQ14689 1571 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 ERCC3P19447 782 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 NBPF6Q5VWK0 638 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 NBPF4Q96M43 638 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 TRIM34Q9BYJ4 488 aa4.29□□□□□ -1.72
GEN1-201ENST00000317402 NRXN1Q9ULB1 1477 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 FER1L6Q2WGJ9 1857 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 TULP4Q9NRJ4 1543 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 SF3A3Q12874 501 aaKnown RBP eCLIP4.28□□□□□ -1.725e-6■■■■□ 19.6
GEN1-201ENST00000317402 PIBF1Q8WXW3 757 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 SUDS3Q9H7L9 328 aaPredicted RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 CDH23Q9H251 3354 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 SMCHD1A6NHR9 2005 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 hCG_1642624A0A1W2PR95 340 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 MRE11P49959 708 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 PROCA1Q8NCQ7 364 aaPredicted RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 NCOA5Q9HCD5 579 aaKnown RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 PIK3C2GO75747 1445 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 PIK3C2BO00750 1634 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 DHX8Q14562 1220 aaKnown RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 PIK3R5Q8WYR1 880 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 USP26Q9BXU7 913 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 SNRKQ9NRH2 765 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 DLC1Q96QB1 1528 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 USP8P40818 1118 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 PTF1AQ7RTS3 328 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 ZNF589Q86UQ0 364 aaPredicted RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 TICAM2Q86XR7 235 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 RYDENQ9NUL5 291 aaKnown RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 ADGRB3O60242 1522 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 NEXMIFQ5QGS0 1516 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 MNS1Q8NEH6 495 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 IQSEC3Q9UPP2 1182 aaPredicted RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 POGZQ7Z3K3 1410 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 MAP3K19Q56UN5 1328 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 NEK4P51957 841 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 NAP1L1P55209 391 aaKnown RBP4.28□□□□□ -1.72
GEN1-201ENST00000317402 CEP85Q6P2H3 762 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 FSD2A1L4K1 749 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 PLXNB1O43157 2135 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 LIG1P18858 919 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 WDR70Q9NW82 654 aa4.28□□□□□ -1.72
GEN1-201ENST00000317402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.28□□□□□ -1.72
GEN1-201ENST00000317402 ESPNB1AK53 854 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 FIBPO43427 364 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 USP48Q86UV5 1035 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 HCLS1P14317 486 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 CT47A1Q5JQC4 288 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 ANO2Q9NQ90 1003 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 TRMT1Q9NXH9 659 aaKnown RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 COL6A6A6NMZ7 2263 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 MED13Q9UHV7 2174 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 ROBO2Q9HCK4 1378 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 CCDC70Q6NSX1 233 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 MED14O60244 1454 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 ABL1P00519 1130 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 SETSIPP0DME0 302 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 LUZP1Q86V48 1076 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 DNAAF5Q86Y56 855 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 SCAF8Q9UPN6 1271 aaKnown RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 TACC3Q9Y6A5 838 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 RICTORQ6R327 1708 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 NKRFO15226 690 aaKnown RBP eCLIP4.27□□□□□ -1.73
GEN1-201ENST00000317402 HMGN5P82970 282 aaKnown RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 SAMD1Q6SPF0 538 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 IL17REQ8NFR9 667 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 TOMM22Q9NS69 142 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 COL15A1P39059 1388 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 KIDINS220Q9ULH0 1771 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 DNM1Q05193 864 aaKnown RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 LONRF3Q496Y0 759 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 LEKR1Q6ZMV7 388 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 DYDC1Q8WWB3 177 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 PPP1R1BQ9UD71 204 aaPredicted RBP4.27□□□□□ -1.73
GEN1-201ENST00000317402 CCDC39Q9UFE4 941 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 SCN4AP35499 1836 aa4.27□□□□□ -1.73
GEN1-201ENST00000317402 CD163L1Q9NR16 1453 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms