RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 NUCB2P80303 420 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 R3HDM1Q15032 1099 aaKnown RBP10.52□□□□□ -0.73
CTC1-201ENST00000315684 IFIT1BQ5T764 474 aaKnown RBP10.52□□□□□ -0.73
CTC1-201ENST00000315684 TMOD4Q9NZQ9 345 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TIMM10P62072 90 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 ZNF496Q96IT1 587 aaPredicted RBP10.52□□□□□ -0.73
CTC1-201ENST00000315684 MPHOSPH6Q99547 160 aaKnown RBP10.52□□□□□ -0.73
CTC1-201ENST00000315684 SLC26A6Q9BXS9 759 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 ALDH1B1P30837 517 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TEX11Q8IYF3 940 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TCEANC2Q96MN5 208 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TSHZ2Q9NRE2 1034 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 HOMER2Q9NSB8 354 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 FAM13BQ9NYF5 915 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TTC37Q6PGP7 1564 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 CCDC194A0A1B0GVG4 234 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 SIK1P57059 783 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 SH3TC1Q8TE82 1336 aa10.52□□□□□ -0.73
CTC1-201ENST00000315684 KRT32Q14532 448 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 PANK2Q9BZ23 570 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 MMRN2Q9H8L6 949 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 CHMP5Q9NZZ3 219 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 EFCAB6Q5THR3 1501 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 NEBLO76041 1014 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 CALM1P0DP23 149 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 CALM2P0DP24 149 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 CALM3P0DP25 149 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 AATFQ9NY61 560 aaKnown RBP eCLIP10.51□□□□□ -0.73
CTC1-201ENST00000315684 SORBS3O60504 671 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 ENOX2Q16206 610 aaKnown RBP10.51□□□□□ -0.73
CTC1-201ENST00000315684 CEP57L1Q8IYX8 460 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 NKTRP30414 1462 aaKnown RBP10.51□□□□□ -0.73
CTC1-201ENST00000315684 CRKLP46109 303 aaKnown RBP10.51□□□□□ -0.73
CTC1-201ENST00000315684 KIAA0825Q8IV33 1275 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 EVI5LQ96CN4 794 aa10.51□□□□□ -0.73
CTC1-201ENST00000315684 PDCP20941 246 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 CNGA1P29973 690 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 RHPN1Q8TCX5 695 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 WASF1Q92558 559 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 DCPSQ96C86 337 aaKnown RBP10.5□□□□□ -0.73
CTC1-201ENST00000315684 NDUFB9Q9Y6M9 179 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 AAMPQ13685 434 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 GPCPD1Q9NPB8 672 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 SMCR8Q8TEV9 937 aaPredicted RBP10.5□□□□□ -0.73
CTC1-201ENST00000315684 SRP68Q9UHB9 627 aaKnown RBP10.5□□□□□ -0.73
CTC1-201ENST00000315684 SMIM5Q71RC9 77 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 RABEP1Q15276 862 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 DLGAP5Q15398 846 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 RXRAP19793 462 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 IL15P40933 162 aaPredicted RBP10.5□□□□□ -0.73
CTC1-201ENST00000315684 CAVIN1Q6NZI2 390 aaKnown RBP10.5□□□□□ -0.73
CTC1-201ENST00000315684 BICD1Q96G01 975 aa10.5□□□□□ -0.73
CTC1-201ENST00000315684 PDE8AO60658 829 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 KLHL10Q6JEL2 608 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 GADL1Q6ZQY3 521 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 NOD1Q9Y239 953 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 TTLL7Q6ZT98 887 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 JMYQ8N9B5 988 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.49□□□□□ -0.73
CTC1-201ENST00000315684 STIM1Q13586 685 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 CPXCR1Q8N123 301 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 GINS2Q9Y248 185 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 PHKG2P15735 406 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 PLBD2Q8NHP8 589 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 SMARCC2Q8TAQ2 1214 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 PAG1Q9NWQ8 432 aa10.49□□□□□ -0.73
CTC1-201ENST00000315684 DNMT1P26358 1616 aaKnown RBP10.49□□□□□ -0.73
CTC1-201ENST00000315684 CLRN2A0PK11 232 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 C8orf76Q96K31 380 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 RIMBP3CA6NJZ7 1639 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 RIMBP3BA6NNM3 1639 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 RIMBP3Q9UFD9 1639 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 WTAPQ15007 396 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 USP16Q9Y5T5 823 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 NLRP1Q9C000 1473 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 KIF5BP33176 963 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 NAT10Q9H0A0 1025 aaKnown RBP10.48□□□□□ -0.73
CTC1-201ENST00000315684 RAD17O75943 681 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 BAG4O95429 457 aaKnown RBP10.48□□□□□ -0.73
CTC1-201ENST00000315684 CAMK4Q16566 473 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 PARP10Q53GL7 1025 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 AKNAD1Q5T1N1 836 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 SERPINC1P01008 464 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 MRPL50Q8N5N7 158 aaKnown RBP10.48□□□□□ -0.73
CTC1-201ENST00000315684 SUPT20HQ8NEM7 779 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 SPATA32Q96LK8 384 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 IL13P35225 146 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 METAP2P50579 478 aaKnown RBP eCLIP10.48□□□□□ -0.73
CTC1-201ENST00000315684 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 DBNDD1Q9H9R9 158 aa10.48□□□□□ -0.73
CTC1-201ENST00000315684 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms