RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NDUFB9Q9Y6M9 179 aa22.19■■□□□ 1.14
CCDC43-201ENST00000315286 KCNQ2O43526 872 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 EIF5P55010 431 aaKnown RBP22.18■■□□□ 1.14
CCDC43-201ENST00000315286 GSE1Q14687 1217 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 TMX3Q96JJ7 454 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 BCL9LQ86UU0 1499 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 CDHR2Q9BYE9 1310 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 A0A0D9SFI3 127 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 CCDC87Q9NVE4 849 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 JCADQ9P266 1359 aa22.18■■□□□ 1.14
CCDC43-201ENST00000315286 CRKLP46109 303 aaKnown RBP22.17■■□□□ 1.14
CCDC43-201ENST00000315286 ITPK1Q13572 414 aa22.17■■□□□ 1.14
CCDC43-201ENST00000315286 ZGPATQ8N5A5 531 aaKnown RBP22.17■■□□□ 1.14
CCDC43-201ENST00000315286 HAUS7Q99871 368 aa22.17■■□□□ 1.14
CCDC43-201ENST00000315286 SNRKQ9NRH2 765 aa22.17■■□□□ 1.14
CCDC43-201ENST00000315286 VPS72Q15906 364 aa22.16■■□□□ 1.14
CCDC43-201ENST00000315286 DNAJC2Q99543 621 aaKnown RBP22.16■■□□□ 1.14
CCDC43-201ENST00000315286 CCDC171Q6TFL3 1326 aa22.16■■□□□ 1.14
CCDC43-201ENST00000315286 TRMT112Q9UI30 125 aaKnown RBP22.16■■□□□ 1.14
CCDC43-201ENST00000315286 PALLDQ8WX93 1383 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 IFIT5Q13325 482 aaKnown RBP22.15■■□□□ 1.14
CCDC43-201ENST00000315286 CWC22Q9HCG8 908 aaKnown RBP22.15■■□□□ 1.14
CCDC43-201ENST00000315286 MYH14Q7Z406 1995 aaKnown RBP22.15■■□□□ 1.14
CCDC43-201ENST00000315286 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 SSFA2P28290 1259 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 NOL8Q76FK4 1167 aaKnown RBP22.15■■□□□ 1.14
CCDC43-201ENST00000315286 ZNF34Q8IZ26 560 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 TTLL11Q8NHH1 800 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 CEP126Q9P2H0 1117 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 FBXO3Q9UK99 471 aa22.15■■□□□ 1.14
CCDC43-201ENST00000315286 UBN2Q6ZU65 1347 aa22.14■■□□□ 1.14
CCDC43-201ENST00000315286 ZNF609O15014 1411 aa22.14■■□□□ 1.13
CCDC43-201ENST00000315286 IRS4O14654 1257 aaPredicted RBP22.14■■□□□ 1.13
CCDC43-201ENST00000315286 NECTIN1Q15223 517 aa22.14■■□□□ 1.13
CCDC43-201ENST00000315286 PRPF40BQ6NWY9 871 aaKnown RBP22.14■■□□□ 1.13
CCDC43-201ENST00000315286 TAF7LQ5H9L4 462 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 MAP4K1Q92918 833 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 MED23Q9ULK4 1368 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 MYH3P11055 1940 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 DDX46Q7L014 1031 aaKnown RBP22.13■■□□□ 1.13
CCDC43-201ENST00000315286 FNBP4Q8N3X1 1017 aaPredicted RBP22.13■■□□□ 1.13
CCDC43-201ENST00000315286 KCNB2Q92953 911 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 GREM2Q9H772 168 aa22.13■■□□□ 1.13
CCDC43-201ENST00000315286 RBM8AQ9Y5S9 174 aaKnown RBP22.13■■□□□ 1.13
CCDC43-201ENST00000315286 CTSWP56202 376 aa22.12■■□□□ 1.13
CCDC43-201ENST00000315286 CUL4AQ13619 759 aa22.12■■□□□ 1.13
CCDC43-201ENST00000315286 IL27Q8NEV9 243 aa22.12■■□□□ 1.13
CCDC43-201ENST00000315286 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-201ENST00000315286 ZNF589Q86UQ0 364 aaPredicted RBP22.11■■□□□ 1.13
CCDC43-201ENST00000315286 CHGBP05060 677 aa22.11■■□□□ 1.13
CCDC43-201ENST00000315286 ITGA6P23229 1130 aa22.11■■□□□ 1.13
CCDC43-201ENST00000315286 NUCB2P80303 420 aa22.11■■□□□ 1.13
CCDC43-201ENST00000315286 TTC14Q96N46 770 aa22.11■■□□□ 1.13
CCDC43-201ENST00000315286 GBP4Q96PP9 640 aa22.11■■□□□ 1.13
CCDC43-201ENST00000315286 RREB1Q92766 1687 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 PKP1Q13835 747 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 DDX11L8A8MPP1 907 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 PDE8AO60658 829 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
CCDC43-201ENST00000315286 KCNJ4P48050 445 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 ADCK5Q3MIX3 580 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 CREB3L3Q68CJ9 461 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 KBTBD3Q8NAB2 608 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 RFX7Q2KHR2 1363 aa22.1■■□□□ 1.13
CCDC43-201ENST00000315286 CICQ96RK0 1608 aaPredicted RBP22.1■■□□□ 1.13
CCDC43-201ENST00000315286 CASTP20810 708 aaKnown RBP22.09■■□□□ 1.13
CCDC43-201ENST00000315286 PAG1Q9NWQ8 432 aa22.09■■□□□ 1.13
CCDC43-201ENST00000315286 AKAP2Q9Y2D5 859 aa22.09■■□□□ 1.13
CCDC43-201ENST00000315286 GOLIM4O00461 696 aa22.08■■□□□ 1.13
CCDC43-201ENST00000315286 CAMTA2O94983 1202 aa22.08■■□□□ 1.13
CCDC43-201ENST00000315286 CPA1P15085 419 aa22.08■■□□□ 1.13
CCDC43-201ENST00000315286 SUSD4Q5VX71 490 aa22.08■■□□□ 1.13
CCDC43-201ENST00000315286 RIPOR2Q9Y4F9 1068 aa22.08■■□□□ 1.13
CCDC43-201ENST00000315286 ANKRD18BA2A2Z9 1011 aa22.08■■□□□ 1.12
CCDC43-201ENST00000315286 TAF5LO75529 589 aa22.08■■□□□ 1.12
CCDC43-201ENST00000315286 IFIT1P09914 478 aaKnown RBP22.08■■□□□ 1.12
CCDC43-201ENST00000315286 ADORA1P30542 326 aa22.08■■□□□ 1.12
CCDC43-201ENST00000315286 LDHAL6AQ6ZMR3 332 aa22.08■■□□□ 1.12
CCDC43-201ENST00000315286 JAKMIP1Q96N16 626 aaKnown RBP22.08■■□□□ 1.12
CCDC43-201ENST00000315286 USP21Q9UK80 565 aa22.08■■□□□ 1.12
CCDC43-201ENST00000315286 ZKSCAN1P17029 563 aaPredicted RBP22.07■■□□□ 1.12
CCDC43-201ENST00000315286 AK2P54819 239 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 CLEC17AQ6ZS10 378 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 XAGE2Q96GT9 111 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 INTS4Q96HW7 963 aaKnown RBP22.07■■□□□ 1.12
CCDC43-201ENST00000315286 SLC27A2O14975 620 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 TRAK2O60296 914 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 SEC62Q99442 399 aaKnown RBP22.07■■□□□ 1.12
CCDC43-201ENST00000315286 TM6SF1Q9BZW5 370 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 ZSWIM6Q9HCJ5 1215 aa22.07■■□□□ 1.12
CCDC43-201ENST00000315286 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
CCDC43-201ENST00000315286 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
CCDC43-201ENST00000315286 SPATA31A6Q5VVP1 1343 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 FAM177BA6PVY3 158 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 MCMDC2Q4G0Z9 681 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 ZDHHC9Q9Y397 364 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 COL5A3P25940 1745 aaPredicted RBP22.05■■□□□ 1.12
CCDC43-201ENST00000315286 METTL24Q5JXM2 366 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
CCDC43-201ENST00000315286 GORABQ5T7V8 394 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms