RNA–Protein interactions for RNA: ENST00000315274.6

MMP1-201, Transcript of matrix metallopeptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP1, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1-201ENST00000315274 BRIP1Q9BX63 1249 aa11.88□□□□□ -0.51
MMP1-201ENST00000315274 GREM2Q9H772 168 aa11.88□□□□□ -0.51
MMP1-201ENST00000315274 SPON1Q9HCB6 807 aa11.88□□□□□ -0.51
MMP1-201ENST00000315274 PPP1R1BQ9UD71 204 aaPredicted RBP11.88□□□□□ -0.51
MMP1-201ENST00000315274 HMMRO75330 724 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 FAM161AQ3B820 660 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 B4GALNT3Q6L9W6 998 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 KLHL34Q8N239 644 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 RWDD1Q9H446 243 aaPredicted RBP11.87□□□□□ -0.51
MMP1-201ENST00000315274 NRXN2Q9P2S2 1712 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 IGHDP01880 384 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 ITGA6P23229 1130 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 PDE6BP35913 854 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
MMP1-201ENST00000315274 MTX1Q13505 466 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 SF3B3Q15393 1217 aaKnown RBP11.87□□□□□ -0.51
MMP1-201ENST00000315274 KLHDC4Q8TBB5 520 aa11.87□□□□□ -0.51
MMP1-201ENST00000315274 LAMB2P55268 1798 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 ANKRD18BA2A2Z9 1011 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 PTGER2P43116 358 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 TAF7LQ5H9L4 462 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 RPGRQ92834 1020 aaKnown RBP11.86□□□□□ -0.51
MMP1-201ENST00000315274 ZNF594Q96JF6 807 aaPredicted RBP11.86□□□□□ -0.51
MMP1-201ENST00000315274 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 SEC31BQ9NQW1 1179 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 TAF1P21675 1872 aa11.86□□□□□ -0.51
MMP1-201ENST00000315274 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
MMP1-201ENST00000315274 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
MMP1-201ENST00000315274 SIL1Q9H173 461 aa11.85□□□□□ -0.51
MMP1-201ENST00000315274 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
MMP1-201ENST00000315274 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
MMP1-201ENST00000315274 H0YIN7 160 aa11.85□□□□□ -0.51
MMP1-201ENST00000315274 SURF6O75683 361 aaKnown RBP11.85□□□□□ -0.51
MMP1-201ENST00000315274 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
MMP1-201ENST00000315274 POLA2Q14181 598 aa11.85□□□□□ -0.51
MMP1-201ENST00000315274 BCL11AQ9H165 835 aa11.85□□□□□ -0.51
MMP1-201ENST00000315274 APBB1O00213 710 aa11.84□□□□□ -0.51
MMP1-201ENST00000315274 C2CD5Q86YS7 1000 aa11.84□□□□□ -0.51
MMP1-201ENST00000315274 RIC1Q4ADV7 1423 aa11.84□□□□□ -0.51
MMP1-201ENST00000315274 KLRG2A4D1S0 409 aaPredicted RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 CHRNA5P30532 468 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 ZNF622Q969S3 477 aaKnown RBP eCLIP11.83□□□□□ -0.52
MMP1-201ENST00000315274 RBM17Q96I25 401 aaKnown RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 SRCAPQ6ZRS2 3230 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 SRGNP10124 158 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 G3BP1Q13283 466 aaKnown RBP eCLIP11.83□□□□□ -0.52
MMP1-201ENST00000315274 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 LDHAL6AQ6ZMR3 332 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 CDC5LQ99459 802 aaKnown RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
MMP1-201ENST00000315274 PUS3Q9BZE2 481 aaKnown RBP11.83□□□□□ -0.52
MMP1-201ENST00000315274 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 NPR1P16066 1061 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 IGHMBP2P38935 993 aaKnown RBP11.82□□□□□ -0.52
MMP1-201ENST00000315274 RPS8P62241 208 aaKnown RBP11.82□□□□□ -0.52
MMP1-201ENST00000315274 ANKRD18AQ8IVF6 992 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 CELF1Q92879 486 aaKnown RBP11.82□□□□□ -0.52
MMP1-201ENST00000315274 MASTLQ96GX5 879 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 COPRSQ9NQ92 184 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 CNNM1Q9NRU3 951 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 C10orf71Q711Q0 1435 aa11.82□□□□□ -0.52
MMP1-201ENST00000315274 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 RTL9Q8NET4 1388 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 SPEF2Q9C093 1822 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 DPEP1P16444 411 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 HOXA10P31260 410 aaPredicted RBP11.81□□□□□ -0.52
MMP1-201ENST00000315274 GRAPQ13588 217 aa11.81□□□□□ -0.52
MMP1-201ENST00000315274 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
MMP1-201ENST00000315274 EYA2O00167 538 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 TGFB2P61812 414 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 CRAMP1Q96RY5 1269 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 WWC3Q9ULE0 1092 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
MMP1-201ENST00000315274 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
MMP1-201ENST00000315274 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 CENPQQ7L2Z9 268 aaPredicted RBP11.79□□□□□ -0.52
MMP1-201ENST00000315274 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
MMP1-201ENST00000315274 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
MMP1-201ENST00000315274 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 COL4A1P02462 1669 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 BBOX1O75936 387 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 STYK1Q6J9G0 422 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 ATG9AQ7Z3C6 839 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
MMP1-201ENST00000315274 BSDC1Q9NW68 430 aaPredicted RBP11.79□□□□□ -0.52
MMP1-201ENST00000315274 ZNF219Q9P2Y4 722 aaPredicted RBP11.79□□□□□ -0.52
MMP1-201ENST00000315274 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
MMP1-201ENST00000315274 SMARCA5O60264 1052 aaPredicted RBP11.78□□□□□ -0.52
MMP1-201ENST00000315274 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms