RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 FUCA2Q9BTY2 467 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 SCAND2PQ9GZW5 306 aaPredicted RBP11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 FPGT-TNNI3KV9GXZ4 949 aa11.47□□□□□ -0.57
LSMEM1-201ENST00000312849 KDM4AO75164 1064 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 CCDC192P0DO97 292 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 LRP10Q7Z4F1 713 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 NECAB1Q8N987 351 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 PLBD2Q8NHP8 589 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 MEGF6O75095 1541 aa11.46□□□□□ -0.57
LSMEM1-201ENST00000312849 PTPN12Q05209 780 aaKnown RBP11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 EPHA10Q5JZY3 1008 aa11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 UBE2Q2Q8WVN8 375 aa11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 CHMP4CQ96CF2 233 aa11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 HAUS7Q99871 368 aa11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.46□□□□□ -0.58
LSMEM1-201ENST00000312849 SPEF2Q9C093 1822 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 ADCY5O95622 1261 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 HMGB1P09429 215 aaKnown RBP11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 HCLS1P14317 486 aaPredicted RBP11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 ATF3P18847 181 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 MAP7D2Q96T17 732 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 GPR108Q9NPR9 543 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
LSMEM1-201ENST00000312849 CSB-PGBD3P0DP91 1061 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 TFCP2Q12800 502 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 NEK1Q96PY6 1258 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 LLPHQ9BRT6 129 aaKnown RBP11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 USP25Q9UHP3 1055 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 DBNLQ9UJU6 430 aaKnown RBP11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 USP16Q9Y5T5 823 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 MYH15Q9Y2K3 1946 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 LAMA4Q16363 1823 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 NUP188Q5SRE5 1749 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 PALLDQ8WX93 1383 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 SH3TC1Q8TE82 1336 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 A0A087WZG4 1122 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 CABP4P57796 275 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 MAP3K11Q16584 847 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 UBE3BQ7Z3V4 1068 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 ZNF589Q86UQ0 364 aaPredicted RBP11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 NUP62CLQ9H1M0 184 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 PDCL3Q9H2J4 239 aa11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 DDX19AQ9NUU7 478 aaKnown RBP11.44□□□□□ -0.58
LSMEM1-201ENST00000312849 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 CPDO75976 1380 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 GOLGA6L4A6NEF3 574 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 DYNC1I1O14576 645 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 CASP7P55210 303 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 GIMAP6Q6P9H5 292 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 CDC37L1Q7L3B6 337 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 TTC6Q86TZ1 520 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 KLHDC4Q8TBB5 520 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 PIBF1Q8WXW3 757 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 GTF3C6Q969F1 213 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 ZSCAN16Q9H4T2 348 aaPredicted RBP11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 HELLSQ9NRZ9 838 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 UBR2Q8IWV8 1755 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 GLI3P10071 1580 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 ZNF609O15014 1411 aa11.43□□□□□ -0.58
LSMEM1-201ENST00000312849 H7C1W4 665 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 MTERF4Q7Z6M4 381 aaKnown RBP11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 DDX54Q8TDD1 881 aaKnown RBP11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 CYP27B1O15528 508 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 CAVIN2O95810 425 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 DSCC1Q9BVC3 393 aa11.42□□□□□ -0.58
LSMEM1-201ENST00000312849 IL15P40933 162 aaPredicted RBP11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 FAM200AQ8TCP9 573 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 PRIMPOLQ96LW4 560 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 DBNDD2Q9BQY9 259 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
LSMEM1-201ENST00000312849 TJP1Q07157 1748 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 UQCRHLA0A096LP55 91 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 UQCRHP07919 91 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 HMGN5P82970 282 aaKnown RBP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 FOXO4P98177 505 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 LRRFIP1Q32MZ4 808 aaKnown RBP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 RBM43Q6ZSC3 357 aaKnown RBP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 Q6ZUG5 572 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 TNMDQ9H2S6 317 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 CLSTN2Q9H4D0 955 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 SPTLC3Q9NUV7 552 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 CWC25Q9NXE8 425 aaPredicted RBP11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 PAPPAQ13219 1627 aa11.4□□□□□ -0.58
LSMEM1-201ENST00000312849 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms