RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 MAP3K5Q99683 1374 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 SF3A1Q15459 793 aaKnown RBP15.97■□□□□ 0.15
NPAS4-201ENST00000311034 PTPN21Q16825 1174 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 CEP135Q66GS9 1140 aa15.97■□□□□ 0.15
NPAS4-201ENST00000311034 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.15
NPAS4-201ENST00000311034 USP6P35125 1406 aa15.96■□□□□ 0.15
NPAS4-201ENST00000311034 ERICH4A6NGS2 130 aa15.96■□□□□ 0.14
NPAS4-201ENST00000311034 USP27XA6NNY8 438 aa15.96■□□□□ 0.14
NPAS4-201ENST00000311034 APPP05067 770 aa15.96■□□□□ 0.14
NPAS4-201ENST00000311034 UBE3BQ7Z3V4 1068 aa15.96■□□□□ 0.14
NPAS4-201ENST00000311034 DDX19AQ9NUU7 478 aaKnown RBP15.96■□□□□ 0.14
NPAS4-201ENST00000311034 CEP170BQ9Y4F5 1589 aaPredicted RBP15.95■□□□□ 0.14
NPAS4-201ENST00000311034 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 SMTNL1A8MU46 457 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 HOXC9P31274 260 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 NECTIN1Q15223 517 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 OTUD7BQ6GQQ9 843 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.95■□□□□ 0.14
NPAS4-201ENST00000311034 TTC41PQ6P2S7 1318 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
NPAS4-201ENST00000311034 NEXNQ0ZGT2 675 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 EAF2Q96CJ1 260 aaPredicted RBP15.94■□□□□ 0.14
NPAS4-201ENST00000311034 CLSTN2Q9H4D0 955 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 ZNF589Q86UQ0 364 aaPredicted RBP15.94■□□□□ 0.14
NPAS4-201ENST00000311034 SKILP12757 684 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 PTPN14Q15678 1187 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 ANKRD7Q92527 254 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 PGBD1Q96JS3 809 aa15.94■□□□□ 0.14
NPAS4-201ENST00000311034 RICTORQ6R327 1708 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 OVOS2A0A0J9YW53 1432 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 OVOS2Q6IE36 1432 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 GNL2Q13823 731 aaKnown RBP15.93■□□□□ 0.14
NPAS4-201ENST00000311034 C11orf57Q6ZUT1 292 aaPredicted RBP15.93■□□□□ 0.14
NPAS4-201ENST00000311034 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
NPAS4-201ENST00000311034 TULP1O00294 542 aaPredicted RBP15.93■□□□□ 0.14
NPAS4-201ENST00000311034 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 TAF7LQ5H9L4 462 aa15.93■□□□□ 0.14
NPAS4-201ENST00000311034 NCOA5Q9HCD5 579 aaKnown RBP15.93■□□□□ 0.14
NPAS4-201ENST00000311034 EPB41L2O43491 1005 aaKnown RBP15.92■□□□□ 0.14
NPAS4-201ENST00000311034 ME1P48163 572 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 EIF4A1P60842 406 aaKnown RBP15.92■□□□□ 0.14
NPAS4-201ENST00000311034 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 CCDC73Q6ZRK6 1079 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 NFATC2IPQ8NCF5 419 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 SDF4Q9BRK5 362 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 BICC1Q9H694 974 aaKnown RBP15.92■□□□□ 0.14
NPAS4-201ENST00000311034 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
NPAS4-201ENST00000311034 Q6ZUG5 572 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 COPS6Q7L5N1 327 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
NPAS4-201ENST00000311034 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 TM6SF1Q9BZW5 370 aa15.92■□□□□ 0.14
NPAS4-201ENST00000311034 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
NPAS4-201ENST00000311034 TIMM10P62072 90 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 ZBTB3Q9H5J0 574 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 OGFRQ9NZT2 677 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 KINO60870 393 aaKnown RBP15.91■□□□□ 0.14
NPAS4-201ENST00000311034 ERC1Q8IUD2 1116 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 CCAR2Q8N163 923 aaKnown RBP15.91■□□□□ 0.14
NPAS4-201ENST00000311034 SUCLG2Q96I99 432 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 CCDC69A6NI79 296 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 SMC2O95347 1197 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 TOB2Q14106 344 aaPredicted RBP15.91■□□□□ 0.14
NPAS4-201ENST00000311034 ELF2Q15723 593 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 RAPGEF4Q8WZA2 1011 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 MAP4K1Q92918 833 aa15.91■□□□□ 0.14
NPAS4-201ENST00000311034 CTIFO43310 598 aaKnown RBP15.9■□□□□ 0.14
NPAS4-201ENST00000311034 RXRAP19793 462 aa15.9■□□□□ 0.14
NPAS4-201ENST00000311034 GOLIM4O00461 696 aa15.9■□□□□ 0.14
NPAS4-201ENST00000311034 AOPEPQ8N6M6 819 aa15.9■□□□□ 0.14
NPAS4-201ENST00000311034 PEAK1Q9H792 1746 aa15.89■□□□□ 0.14
NPAS4-201ENST00000311034 PLA2G4DQ86XP0 818 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 SIRT1Q96EB6 747 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 IL17RAQ96F46 866 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 PAXBP1Q9Y5B6 917 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 SASH1O94885 1247 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 KIF20AO95235 890 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 XAGE3Q8WTP9 111 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 TRERF1Q96PN7 1200 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 CTNNA3Q9UI47 895 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 HIP1O00291 1037 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 NEK1Q96PY6 1258 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 ITSN1Q15811 1721 aa15.89■□□□□ 0.13
NPAS4-201ENST00000311034 LRRC8AQ8IWT6 810 aa15.88■□□□□ 0.13
NPAS4-201ENST00000311034 TDRD7Q8NHU6 1098 aaKnown RBP15.88■□□□□ 0.13
NPAS4-201ENST00000311034 FEZ1Q99689 392 aa15.88■□□□□ 0.13
NPAS4-201ENST00000311034 DBF4Q9UBU7 674 aaPredicted RBP15.88■□□□□ 0.13
NPAS4-201ENST00000311034 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
NPAS4-201ENST00000311034 MTMR7Q9Y216 660 aa15.88■□□□□ 0.13
NPAS4-201ENST00000311034 FSIP1Q8NA03 581 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms