RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 ZNF219Q9P2Y4 722 aaPredicted RBP12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 API5Q9BZZ5 524 aaKnown RBP12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 DLEC1Q9Y238 1755 aa12.28□□□□□ -0.44
CHRNA9-201ENST00000310169 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.44
CHRNA9-201ENST00000310169 PRPF40BQ6NWY9 871 aaKnown RBP12.27□□□□□ -0.44
CHRNA9-201ENST00000310169 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.44
CHRNA9-201ENST00000310169 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
CHRNA9-201ENST00000310169 TNRC6CQ9HCJ0 1690 aaKnown RBP12.27□□□□□ -0.45
CHRNA9-201ENST00000310169 PDE8AO60658 829 aa12.27□□□□□ -0.45
CHRNA9-201ENST00000310169 ALDH1L1O75891 902 aa12.27□□□□□ -0.45
CHRNA9-201ENST00000310169 DDX46Q7L014 1031 aaKnown RBP12.27□□□□□ -0.45
CHRNA9-201ENST00000310169 H7C1W4 665 aa12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 C21orf2O43822 256 aa12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 ARHGAP45Q92619 1136 aa12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 TMX4Q9H1E5 349 aaPredicted RBP12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 HOXA10P31260 410 aaPredicted RBP12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 IL27Q8NEV9 243 aa12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
CHRNA9-201ENST00000310169 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 GRM8O00222 908 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 CCDC152Q4G0S7 254 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 CRAMP1Q96RY5 1269 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 DDX60Q8IY21 1712 aaKnown RBP12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 LAMB2P55268 1798 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 GSE1Q14687 1217 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 SF3B3Q15393 1217 aaKnown RBP12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 ATF7IPQ6VMQ6 1270 aa12.25□□□□□ -0.45
CHRNA9-201ENST00000310169 SOGA3Q5TF21 947 aa12.24□□□□□ -0.45
CHRNA9-201ENST00000310169 CLUAP1Q96AJ1 413 aa12.24□□□□□ -0.45
CHRNA9-201ENST00000310169 CHD4Q14839 1912 aa12.24□□□□□ -0.45
CHRNA9-201ENST00000310169 MYH3P11055 1940 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 CTSWP56202 376 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 CENPQQ7L2Z9 268 aaPredicted RBP12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 ABCC4O15439 1325 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 PPEF1O14829 653 aaPredicted RBP12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 BBOX1O75936 387 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 TRIM27P14373 513 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 FTSJ3Q8IY81 847 aaKnown RBP12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 TAF1P21675 1872 aa12.23□□□□□ -0.45
CHRNA9-201ENST00000310169 GRAPQ13588 217 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 CHMP3Q9Y3E7 222 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 CASP7P55210 303 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
CHRNA9-201ENST00000310169 RTKN2Q8IZC4 609 aa12.21□□□□□ -0.45
CHRNA9-201ENST00000310169 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
CHRNA9-201ENST00000310169 RPS8P62241 208 aaKnown RBP12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 PDE4CQ08493 712 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 OLFM4Q6UX06 510 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 C7orf43Q8WVR3 580 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 USP44Q9H0E7 712 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 SEC31BQ9NQW1 1179 aa12.21□□□□□ -0.46
CHRNA9-201ENST00000310169 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 ANKRD18AQ8IVF6 992 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 CELF1Q92879 486 aaKnown RBP12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 CDC5LQ99459 802 aaKnown RBP12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 GREM2Q9H772 168 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 ATP6V0A2Q9Y487 856 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 UBTFL1P0CB47 393 aaPredicted RBP12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 LMBR1LQ6UX01 489 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 DZIP1LQ8IYY4 767 aaKnown RBP12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
CHRNA9-201ENST00000310169 ITGA6P23229 1130 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 YY1P25490 414 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 FOXO4P98177 505 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 RASSF7Q02833 373 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 IFIT5Q13325 482 aaKnown RBP12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 SP8Q8IXZ3 490 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 SUCLG2Q96I99 432 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 UTYO14607 1347 aa12.19□□□□□ -0.46
CHRNA9-201ENST00000310169 CSF1RP07333 972 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 CCDC88AQ3V6T2 1871 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 ANKRD18BA2A2Z9 1011 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 NFKBIEO00221 500 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 PDIA4P13667 645 aaKnown RBP12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 LMNB1P20700 586 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 TAF7LQ5H9L4 462 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 ITPRIPQ8IWB1 547 aa12.18□□□□□ -0.46
CHRNA9-201ENST00000310169 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms