RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 CCDC113Q9H0I3 377 aa9.48□□□□□ -0.89
PPARGC1B-201ENST00000309241 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 AK9Q5TCS8 1911 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 TRAF1Q13077 416 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 NBPF8Q3BBV2 869 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 SYCP3Q8IZU3 236 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 NAPBQ9H115 298 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 ZBTB17Q13105 803 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 POLD1P28340 1107 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 ZC3H6P61129 1189 aaKnown RBP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 PLS1Q14651 629 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 CCDC117Q8IWD4 279 aaPredicted RBP9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 ATAD2BQ9ULI0 1458 aa9.47□□□□□ -0.89
PPARGC1B-201ENST00000309241 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 IRX5P78411 483 aaPredicted RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 PWP2Q15269 919 aaKnown RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 RMND1Q9NWS8 449 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 A0A087WZG4 1122 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 SPTY2D1Q68D10 685 aaPredicted RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 USP37Q86T82 979 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 ZNF444Q8N0Y2 327 aaPredicted RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 CCDC114Q96M63 670 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 GOPCQ9HD26 462 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 PHACTR2O75167 634 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 DMRT2Q9Y5R5 561 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 EPRSP07814 1512 aaKnown RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 IFIT5Q13325 482 aaKnown RBP9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 ELF2Q15723 593 aa9.46□□□□□ -0.89
PPARGC1B-201ENST00000309241 B4DLN1 442 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 MRPL12P52815 198 aaKnown RBP9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 BCL2L12Q9HB09 334 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 UBE4AQ14139 1066 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 SLMAPQ14BN4 828 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 ICE2Q659A1 982 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 DAAM2Q86T65 1068 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 BIRC2Q13490 618 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 ZSCAN26Q16670 478 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 NEK11Q8NG66 645 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 SKILP12757 684 aa9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.46□□□□□ -0.9
PPARGC1B-201ENST00000309241 TRMT1LQ7Z2T5 733 aaKnown RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 RAD54L2Q9Y4B4 1467 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 FAM135AQ9P2D6 1515 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 ZFYP08048 801 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 IRX4P78413 519 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 DBN1Q16643 649 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 RAB3IL1Q8TBN0 382 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 TSGA10Q9BZW7 698 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 KIF14Q15058 1648 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 INPP5BP32019 993 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 AMPD3Q01432 767 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 STXBP4Q6ZWJ1 553 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 NCBP1Q09161 790 aaKnown RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 PPP2R5EQ16537 467 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CCDC77Q9BR77 488 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 ZSWIM4Q9H7M6 989 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 IFFO1Q0D2I5 559 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CFAP100Q494V2 611 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CCDC12Q8WUD4 166 aaPredicted RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 BCAP29Q9UHQ4 241 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 KIF1CO43896 1103 aaKnown RBP9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CHD1LQ86WJ1 897 aa9.45□□□□□ -0.9
PPARGC1B-201ENST00000309241 CCDC194A0A1B0GVG4 234 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 PTPRCP08575 1304 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 PTPN23Q9H3S7 1636 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 FRMD3A2A2Y4 597 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 KIF5BP33176 963 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 RFC4P35249 363 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 SH3BP5O60239 455 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 ACTN2P35609 894 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 PEX19P40855 299 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 CATIPQ7Z7H3 387 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 IKBKGQ9Y6K9 419 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 INTS4Q96HW7 963 aaKnown RBP9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 NBPF6Q5VWK0 638 aa9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 NBPF5PQ86XG9 351 aaPredicted RBP9.44□□□□□ -0.9
PPARGC1B-201ENST00000309241 NBPF4Q96M43 638 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms