RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 NBR1Q14596 966 aa9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 KRT24Q2M2I5 525 aa9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 COPS6Q7L5N1 327 aa9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 ZNF34Q8IZ26 560 aa9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 UTP14AQ9BVJ6 771 aaKnown RBP9.85□□□□□ -0.83
TM4SF1-201ENST00000305366 IL16Q14005 1332 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 FZD9O00144 591 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 NTSR2O95665 410 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 IGHDP01880 384 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 DEKP35659 375 aaKnown RBP9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 GRM1Q13255 1194 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 PDIA6Q15084 440 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 CRY2Q49AN0 593 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 CNTROBQ8N137 903 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 XAGE3Q8WTP9 111 aa9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
TM4SF1-201ENST00000305366 TMEM88BA6NKF7 163 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 RGL2O15211 777 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 LMOD1P29536 600 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 EPS15P42566 896 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 FMR1Q06787 632 aaKnown RBP eCLIP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PANK1Q8TE04 598 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 COG6Q9Y2V7 657 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 SLX4Q8IY92 1834 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PPIP5K2O43314 1243 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 ITGBL1O95965 494 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 HOXA10P31260 410 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 VEGFBP49765 207 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 AOC3Q16853 763 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PARP10Q53GL7 1025 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PNMA8AQ86V59 439 aaPredicted RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 NIM1KQ8IY84 436 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 GPC2Q8N158 579 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 CRAMP1Q96RY5 1269 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 PSMD1Q99460 953 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 ABT1Q9ULW3 272 aaKnown RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 VIRMAQ69YN4 1812 aaKnown RBP9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 SCN7AQ01118 1682 aa9.83□□□□□ -0.84
TM4SF1-201ENST00000305366 ANKRD31Q8N7Z5 1873 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 WDR90Q96KV7 1748 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 LHX8Q68G74 356 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 TRMT112Q9UI30 125 aaKnown RBP9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 SBF1O95248 1867 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 COL11A2P13942 1736 aaPredicted RBP9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 PASKQ96RG2 1323 aa9.82□□□□□ -0.84
TM4SF1-201ENST00000305366 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
TM4SF1-201ENST00000305366 RGS3P49796 1198 aa9.81□□□□□ -0.84
TM4SF1-201ENST00000305366 LMOD3Q0VAK6 560 aa9.81□□□□□ -0.84
TM4SF1-201ENST00000305366 TNRC6CQ9HCJ0 1690 aaKnown RBP9.81□□□□□ -0.84
TM4SF1-201ENST00000305366 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 FOXN1O15353 648 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 RLBP1P12271 317 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 DEFB115Q30KQ5 88 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 DPP8Q6V1X1 898 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 LRP10Q7Z4F1 713 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 NLRP10Q86W26 655 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 FRAT1Q92837 279 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 AIDAQ96BJ3 306 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 CHPF2Q9P2E5 772 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 ATP6V0A2Q9Y487 856 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 TRAF5O00463 557 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 RAD17O75943 681 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 TCIRG1Q13488 830 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 SLC10A5Q5PT55 438 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 DDX46Q7L014 1031 aaKnown RBP9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 MPNDQ8N594 471 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 TRIM35Q9UPQ4 493 aa9.8□□□□□ -0.84
TM4SF1-201ENST00000305366 ABCC4O15439 1325 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 CNTNAP1P78357 1384 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 ELL2O00472 640 aaPredicted RBP9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 CHL1O00533 1208 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 SCNN1DP51172 638 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 HSP90AB3PQ58FF7 597 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 HDGFL1Q5TGJ6 251 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 FAM89AQ96GI7 184 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 RWDD1Q9H446 243 aaPredicted RBP9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 DDX21Q9NR30 783 aaKnown RBP eCLIP9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 PCNTO95613 3336 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
TM4SF1-201ENST00000305366 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 BBOX1O75936 387 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 CXCL9Q07325 125 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 BCL2L13Q9BXK5 485 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 ZNRF3Q9ULT6 936 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 SH3TC1Q8TE82 1336 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms