RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 SSFA2P28290 1259 aa11.7□□□□□ -0.54
PRPF8-201ENST00000304992 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
PRPF8-201ENST00000304992 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
PRPF8-201ENST00000304992 PRC1O43663 620 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 MCM5P33992 734 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 IQCEQ6IPM2 695 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 TOP1P11387 765 aaKnown RBP11.69□□□□□ -0.54
PRPF8-201ENST00000304992 BRF1Q92994 677 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
PRPF8-201ENST00000304992 SFPQP23246 707 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRPF8-201ENST00000304992 KSR2Q6VAB6 950 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 LEKR1Q6ZMV7 388 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 CCDC148Q8NFR7 591 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 CTNNA2P26232 953 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
PRPF8-201ENST00000304992 BICRAQ9NZM4 1560 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 KIF20AO95235 890 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 KRT24Q2M2I5 525 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 TRAPPC3LQ5T215 181 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 SYCP2Q9BX26 1530 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 ERLIN1O75477 346 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CETN1Q12798 172 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
PRPF8-201ENST00000304992 AMPD3Q01432 767 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 ESR2Q92731 530 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 DDX17Q92841 729 aaKnown RBP11.68□□□□□ -0.54
PRPF8-201ENST00000304992 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 ZBTB43O43298 467 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 MCM9Q9NXL9 1143 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 TBCAO75347 108 aaKnown RBP11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CALM1P0DP23 149 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CALM2P0DP24 149 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CALM3P0DP25 149 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
PRPF8-201ENST00000304992 LMOD1P29536 600 aaPredicted RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 SP4Q02446 784 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 CHST3Q7LGC8 479 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 EZRP15311 586 aaKnown RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 TTC22Q5TAA0 569 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 KRT23Q9C075 422 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 BIN2Q9UBW5 565 aaPredicted RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 CCNL1Q9UK58 526 aaPredicted RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 SMARCC2Q8TAQ2 1214 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 IL15P40933 162 aaPredicted RBP11.67□□□□□ -0.54
PRPF8-201ENST00000304992 RTN1Q16799 776 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 PLCH2O75038 1416 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 ATP10BO94823 1461 aa11.67□□□□□ -0.54
PRPF8-201ENST00000304992 STX6O43752 255 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 IGHDP01880 384 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 AFMP43652 599 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 NAPAP54920 295 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 MAP3K9P80192 1104 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 CWC15Q9P013 229 aaKnown RBP11.66□□□□□ -0.54
PRPF8-201ENST00000304992 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 PRPF4BQ13523 1007 aaKnown RBP11.66□□□□□ -0.54
PRPF8-201ENST00000304992 CCDC174Q6PII3 467 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 STXBP4Q6ZWJ1 553 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 STK32BQ9NY57 414 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 COMMD10Q9Y6G5 202 aa11.66□□□□□ -0.54
PRPF8-201ENST00000304992 KIF4BQ2VIQ3 1234 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 EYA1Q99502 592 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 ZNF518AQ6AHZ1 1483 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 HSP90AA4PQ58FG1 418 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 LUZP1Q86V48 1076 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 SDSP20132 328 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 SAP30BPQ9UHR5 308 aaKnown RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 NOP2P46087 812 aaKnown RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 TRMT1Q9NXH9 659 aaKnown RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 CLIP2Q9UDT6 1046 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 ZFYP08048 801 aaPredicted RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 NBPF7P0C2Y1 421 aaPredicted RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 CNBD1Q8NA66 436 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 EXOC1Q9NV70 894 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 HMG20BQ9P0W2 317 aa11.65□□□□□ -0.54
PRPF8-201ENST00000304992 RBM8AQ9Y5S9 174 aaKnown RBP11.65□□□□□ -0.54
PRPF8-201ENST00000304992 KIF5CO60282 957 aa11.65□□□□□ -0.55
PRPF8-201ENST00000304992 LDHBP07195 334 aaKnown RBP11.65□□□□□ -0.55
PRPF8-201ENST00000304992 TCHPQ9BT92 498 aa11.65□□□□□ -0.55
PRPF8-201ENST00000304992 FAM89AQ96GI7 184 aa11.64□□□□□ -0.55
PRPF8-201ENST00000304992 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
PRPF8-201ENST00000304992 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
PRPF8-201ENST00000304992 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
PRPF8-201ENST00000304992 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
PRPF8-201ENST00000304992 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms