RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 AKR1B10O60218 316 aa12.87□□□□□ -0.35
GCN1-201ENST00000300648 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
GCN1-201ENST00000300648 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■□□ 16.2
GCN1-201ENST00000300648 PPFIBP2Q8ND30 876 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 ERCC6LQ2NKX8 1250 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 DZIP1Q86YF9 867 aaKnown RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 CACNA2D3Q8IZS8 1091 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 UBA7P41226 1012 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 UBASH3AP57075 661 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 A0A1B0GUL7 405 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 NOP2P46087 812 aaKnown RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 COMMD10Q9Y6G5 202 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 CLGNO14967 610 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 DHX37Q8IY37 1157 aaKnown RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 MSANTD4Q8NCY6 345 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 SNX21Q969T3 373 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 ARHGAP25P42331 645 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 PDE4BQ07343 736 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 MAP7D1Q3KQU3 841 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 NAIPQ13075 1403 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 SKILP12757 684 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 ATP11AP98196 1134 aa12.86□□□□□ -0.35
GCN1-201ENST00000300648 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
GCN1-201ENST00000300648 IDH1O75874 414 aaKnown RBP12.85□□□□□ -0.35
GCN1-201ENST00000300648 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 SLC5A1P13866 664 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.356e-11■■□□□ 11.4
GCN1-201ENST00000300648 FAM76AQ8TAV0 307 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 N4BP3O15049 544 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 MKNK2Q9HBH9 465 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 MXRA7P84157 204 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 KIF5AQ12840 1032 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 BICDL1Q6ZP65 573 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.85□□□□□ -0.35
GCN1-201ENST00000300648 FAM184BQ9ULE4 1060 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 DUOX2Q9NRD8 1548 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 PSMA7O14818 248 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 CNNM2Q9H8M5 875 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 SYKP43405 635 aa12.85□□□□□ -0.35
GCN1-201ENST00000300648 UNC13AQ9UPW8 1703 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 GABPB1Q06547 395 aaPredicted RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 GIGYF1O75420 1035 aaPredicted RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 ZSCAN22P10073 491 aaPredicted RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 TNNC1P63316 161 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 PUS7Q96PZ0 661 aaKnown RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 MYO1BO43795 1136 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 TRIM14Q14142 442 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 CNGA4Q8IV77 575 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 RSPH14Q9UHP6 348 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 CFAP70Q5T0N1 1121 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 STMN2Q93045 179 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 RARSP54136 660 aaKnown RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 ZBTB16Q05516 673 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 PLB1Q6P1J6 1458 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 TSNAXIP1Q2TAA8 658 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 ARHGAP24Q8N264 748 aa12.84□□□□□ -0.35
GCN1-201ENST00000300648 TRMT1Q9NXH9 659 aaKnown RBP12.84□□□□□ -0.35
GCN1-201ENST00000300648 GJB2P29033 226 aa12.83□□□□□ -0.35
GCN1-201ENST00000300648 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.35
GCN1-201ENST00000300648 VCXQ9H320 206 aa12.83□□□□□ -0.35
GCN1-201ENST00000300648 GRIN2AQ12879 1464 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
GCN1-201ENST00000300648 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
GCN1-201ENST00000300648 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 TRIM47Q96LD4 638 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 KDM4AO75164 1064 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 GBP1P32455 592 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 CSRNP2Q9H175 543 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 RAPGEF6Q8TEU7 1601 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 GMNNO75496 209 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 CIB2O75838 187 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 KRT23Q9C075 422 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 RPRD2Q5VT52 1461 aaKnown RBP12.83□□□□□ -0.36
GCN1-201ENST00000300648 GOLGA8AA7E2F4 631 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 USP5P45974 858 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 FERMT3Q86UX7 667 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 SPATS2Q86XZ4 545 aaKnown RBP12.83□□□□□ -0.36
GCN1-201ENST00000300648 NCOA7Q8NI08 942 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 ATRIPQ8WXE1 791 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
GCN1-201ENST00000300648 CPLX4Q7Z7G2 160 aa12.82□□□□□ -0.36
GCN1-201ENST00000300648 GABPB2Q8TAK5 448 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms