RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CYP7A1P22680 504 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 KIF5BP33176 963 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 AMPD3Q01432 767 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SMC1AQ14683 1233 aaKnown RBP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PA2G4Q9UQ80 394 aaKnown RBP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 N4BP3O15049 544 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 Q6ZUG5 572 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 IPO4Q8TEX9 1081 aaKnown RBP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 WTAPQ15007 396 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SLF2Q8IX21 1173 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SYKP43405 635 aa15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 IFIT1BQ5T764 474 aaKnown RBP15.56■□□□□ 0.08
CHRFAM7A-201ENST00000299847 USP48Q86UV5 1035 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 UBASH3AP57075 661 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ALG1Q9BT22 464 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 STAMBPO95630 424 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 MCM3P25205 808 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 STAT6P42226 847 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CCDC102BQ68D86 513 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CDC5LQ99459 802 aaKnown RBP15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CABP5Q9NP86 173 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 KIF20AO95235 890 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PLIN2Q99541 437 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 DNAI2Q9GZS0 605 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TNNQ9UQP3 1299 aa15.55■□□□□ 0.08
CHRFAM7A-201ENST00000299847 RXRAP19793 462 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ABCC11Q96J66 1382 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CCDC175P0C221 793 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PLS1Q14651 629 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NBPF6Q5VWK0 638 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NBPF4Q96M43 638 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ABCC5O15440 1437 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TBCAO75347 108 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ZSCAN22P10073 491 aaPredicted RBP15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 UBE2HP62256 183 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 IFNL2Q8IZJ0 200 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 AOPEPQ8N6M6 819 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 BAG3O95817 575 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 RHPN1Q8TCX5 695 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 PIK3R4Q99570 1358 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 GSDMDP57764 484 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CETN1Q12798 172 aa15.54■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ACEP12821 1306 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CCDC141Q6ZP82 1450 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CALM1P0DP23 149 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CALM2P0DP24 149 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CALM3P0DP25 149 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 SYNCQ9H7C4 482 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 HLA-DOAP06340 250 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 MCM5P33992 734 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 FAM212AQ96EL1 285 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 MRVI1Q9Y6F6 885 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CRNKL1Q9BZJ0 848 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 DNAJC25Q9H1X3 360 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 RBM8AQ9Y5S9 174 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 FAM114A1Q8IWE2 563 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 DHX58Q96C10 678 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 CAPZA3Q96KX2 299 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ZBTB21Q9ULJ3 1066 aa15.53■□□□□ 0.08
CHRFAM7A-201ENST00000299847 NAA15Q9BXJ9 866 aaKnown RBP15.52■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TOPBP1Q92547 1522 aa15.52■□□□□ 0.08
CHRFAM7A-201ENST00000299847 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.08
CHRFAM7A-201ENST00000299847 TAOK3Q9H2K8 898 aa15.52■□□□□ 0.08
CHRFAM7A-201ENST00000299847 ATP6V1AP38606 617 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NUCB1Q02818 461 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 IDI1Q13907 227 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 MIGA1Q8NAN2 632 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ZBTB43O43298 467 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.07
CHRFAM7A-201ENST00000299847 A0A1W2PRG0 241 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 FSD2A1L4K1 749 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SMIM23A6NLE4 172 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 HSF2BPO75031 334 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ST5P78524 1137 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NMIQ13287 307 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 BMP2KLQ5H9B9 411 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CCDC174Q6PII3 467 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 HELBQ8NG08 1087 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 TBC1D32Q96NH3 1257 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 AKR1B10O60218 316 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 RTN1Q16799 776 aa15.51■□□□□ 0.07
CHRFAM7A-201ENST00000299847 ARL1P40616 181 aaPredicted RBP15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 STX17P56962 302 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 PPP1R14CQ8TAE6 165 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 RBM26Q5T8P6 1007 aaKnown RBP15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 DNAI1Q9UI46 699 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 KRT13P13646 458 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 CD109Q6YHK3 1445 aa15.5■□□□□ 0.07
CHRFAM7A-201ENST00000299847 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms