RNA–Protein interactions for RNA: ENST00000295872.8

SPICE1-201, Transcript of spindle and centriole associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPICE1, Length 5,417 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPICE1-201ENST00000295872 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
SPICE1-201ENST00000295872 ZNHIT6Q9NWK9 470 aaKnown RBP15.4■□□□□ 0.06
SPICE1-201ENST00000295872 TRIM35Q9UPQ4 493 aa15.4■□□□□ 0.06
SPICE1-201ENST00000295872 GOLGA8AA7E2F4 631 aa15.4■□□□□ 0.06
SPICE1-201ENST00000295872 BMP2KQ9NSY1 1161 aaPredicted RBP15.4■□□□□ 0.06
SPICE1-201ENST00000295872 BRPF1P55201 1214 aaPredicted RBP15.39■□□□□ 0.05
SPICE1-201ENST00000295872 PLBD2Q8NHP8 589 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 SH3TC1Q8TE82 1336 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 CHL1O00533 1208 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 GJB2P29033 226 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 STX6O43752 255 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 PDE4BQ07343 736 aa15.39■□□□□ 0.05
SPICE1-201ENST00000295872 PRDM15P57071 1507 aaPredicted RBP15.39■□□□□ 0.05
SPICE1-201ENST00000295872 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 SSRP1Q08945 709 aaKnown RBP15.38■□□□□ 0.05
SPICE1-201ENST00000295872 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 SNX21Q969T3 373 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 ARHGAP31Q2M1Z3 1444 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 CT47A1Q5JQC4 288 aaPredicted RBP15.38■□□□□ 0.05
SPICE1-201ENST00000295872 ZBTB7BO15156 539 aaPredicted RBP15.38■□□□□ 0.05
SPICE1-201ENST00000295872 CTAGE5O15320 804 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 A1BGP04217 495 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 TEX35Q5T0J7 233 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 MTERF4Q7Z6M4 381 aaKnown RBP15.38■□□□□ 0.05
SPICE1-201ENST00000295872 ADCY10Q96PN6 1610 aa15.38■□□□□ 0.05
SPICE1-201ENST00000295872 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
SPICE1-201ENST00000295872 CATIPQ7Z7H3 387 aa15.37■□□□□ 0.05
SPICE1-201ENST00000295872 CYP7A1P22680 504 aa15.37■□□□□ 0.05
SPICE1-201ENST00000295872 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
SPICE1-201ENST00000295872 CARD10Q9BWT7 1032 aa15.37■□□□□ 0.05
SPICE1-201ENST00000295872 RIMBP2O15034 1052 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 FLAD1Q8NFF5 587 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 TMX3Q96JJ7 454 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 DDX19AQ9NUU7 478 aaKnown RBP15.36■□□□□ 0.05
SPICE1-201ENST00000295872 A2ML1A8K2U0 1454 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 FAM89AQ96GI7 184 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 PHKG2P15735 406 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 MCMDC2Q4G0Z9 681 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
SPICE1-201ENST00000295872 HELBQ8NG08 1087 aaPredicted RBP15.36■□□□□ 0.05
SPICE1-201ENST00000295872 CAGE1Q8TC20 777 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
SPICE1-201ENST00000295872 USP16Q9Y5T5 823 aa15.36■□□□□ 0.05
SPICE1-201ENST00000295872 TSPY2A6NKD2 308 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 H0YIN7 160 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 BAG4O95429 457 aaKnown RBP15.35■□□□□ 0.05
SPICE1-201ENST00000295872 NF2P35240 595 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 FAM135BQ49AJ0 1406 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 CCT2P78371 535 aaKnown RBP15.35■□□□□ 0.05
SPICE1-201ENST00000295872 BRINP3Q76B58 766 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 ARHGEF25Q86VW2 580 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 TXLNBQ8N3L3 684 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 LUC7LQ9NQ29 371 aaKnown RBP15.35■□□□□ 0.05
SPICE1-201ENST00000295872 RBM8AQ9Y5S9 174 aaKnown RBP15.35■□□□□ 0.05
SPICE1-201ENST00000295872 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
SPICE1-201ENST00000295872 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 MFSD6Q6ZSS7 791 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 MAP7D2Q96T17 732 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 SYNMO15061 1565 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 MCM5P33992 734 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 PRM3Q9NNZ6 103 aa15.35■□□□□ 0.05
SPICE1-201ENST00000295872 CAMK4Q16566 473 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 RNF123Q5XPI4 1314 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 CCDC191Q8NCU4 936 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 RUFY1Q96T51 708 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 PA2G4Q9UQ80 394 aaKnown RBP15.34■□□□□ 0.05
SPICE1-201ENST00000295872 IARSP41252 1262 aaKnown RBP15.34■□□□□ 0.05
SPICE1-201ENST00000295872 TNIP1Q15025 636 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
SPICE1-201ENST00000295872 METTL22Q9BUU2 404 aaPredicted RBP15.34■□□□□ 0.05
SPICE1-201ENST00000295872 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
SPICE1-201ENST00000295872 GUCY1B3Q02153 619 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 CUL5Q93034 780 aa15.34■□□□□ 0.05
SPICE1-201ENST00000295872 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.05
SPICE1-201ENST00000295872 VEZTQ9HBM0 779 aa15.33■□□□□ 0.05
SPICE1-201ENST00000295872 RAD50Q92878 1312 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 KIF5BP33176 963 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 ERCC4Q92889 916 aaPredicted RBP15.33■□□□□ 0.04
SPICE1-201ENST00000295872 ZSCAN16Q9H4T2 348 aaPredicted RBP15.33■□□□□ 0.04
SPICE1-201ENST00000295872 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.04
SPICE1-201ENST00000295872 HAND2P61296 217 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 ODF2Q5BJF6 829 aa15.33■□□□□ 0.04
SPICE1-201ENST00000295872 LARP6Q9BRS8 491 aaKnown RBP15.33■□□□□ 0.04
SPICE1-201ENST00000295872 ESPNB1AK53 854 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 SSBP05455 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPICE1-201ENST00000295872 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPICE1-201ENST00000295872 G2E3Q7L622 706 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 KRT27Q7Z3Y8 459 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 KRT23Q9C075 422 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 HSP90B2PQ58FF3 399 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 PDE8AO60658 829 aa15.32■□□□□ 0.04
SPICE1-201ENST00000295872 KLHL40Q2TBA0 621 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms