RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
MRPL55-201ENST00000295008 PCDHB15Q9Y5E8 787 aa19.87■□□□□ 0.77
MRPL55-201ENST00000295008 MTX1Q13505 466 aa19.86■□□□□ 0.77
MRPL55-201ENST00000295008 SF3B3Q15393 1217 aaKnown RBP19.86■□□□□ 0.77
MRPL55-201ENST00000295008 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
MRPL55-201ENST00000295008 COL4A1P02462 1669 aa19.86■□□□□ 0.77
MRPL55-201ENST00000295008 LRP5O75197 1615 aa19.86■□□□□ 0.77
MRPL55-201ENST00000295008 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 RTL9Q8NET4 1388 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 PNMA6EA0A0J9YXQ4 647 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
MRPL55-201ENST00000295008 PDE6BP35913 854 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 CRY2Q49AN0 593 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 CCDC152Q4G0S7 254 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 RPAP2Q8IXW5 612 aaPredicted RBP19.85■□□□□ 0.77
MRPL55-201ENST00000295008 GREM2Q9H772 168 aa19.85■□□□□ 0.77
MRPL55-201ENST00000295008 SRGAP3O43295 1099 aa19.84■□□□□ 0.77
MRPL55-201ENST00000295008 ATP8B2P98198 1209 aa19.84■□□□□ 0.77
MRPL55-201ENST00000295008 SIRT2Q8IXJ6 389 aa19.84■□□□□ 0.77
MRPL55-201ENST00000295008 ERICH6BQ5W0A0 696 aa19.83■□□□□ 0.77
MRPL55-201ENST00000295008 SPEF2Q9C093 1822 aa19.83■□□□□ 0.76
MRPL55-201ENST00000295008 ITGA6P23229 1130 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 POLA2Q14181 598 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 C2CD5Q86YS7 1000 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 KLHL34Q8N239 644 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 SSH3Q8TE77 659 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 RPGRQ92834 1020 aaKnown RBP19.82■□□□□ 0.76
MRPL55-201ENST00000295008 SEC31BQ9NQW1 1179 aa19.82■□□□□ 0.76
MRPL55-201ENST00000295008 SRGNP10124 158 aa19.81■□□□□ 0.76
MRPL55-201ENST00000295008 CHRNA5P30532 468 aa19.81■□□□□ 0.76
MRPL55-201ENST00000295008 RFX5P48382 616 aaPredicted RBP19.81■□□□□ 0.76
MRPL55-201ENST00000295008 IFIT5Q13325 482 aaKnown RBP19.81■□□□□ 0.76
MRPL55-201ENST00000295008 CCDC57Q2TAC2 916 aa19.81■□□□□ 0.76
MRPL55-201ENST00000295008 PPP1R1BQ9UD71 204 aaPredicted RBP19.81■□□□□ 0.76
MRPL55-201ENST00000295008 TAF1P21675 1872 aa19.8■□□□□ 0.76
MRPL55-201ENST00000295008 ANKRD18BA2A2Z9 1011 aa19.8■□□□□ 0.76
MRPL55-201ENST00000295008 HMMRO75330 724 aa19.8■□□□□ 0.76
MRPL55-201ENST00000295008 DDX46Q7L014 1031 aaKnown RBP19.8■□□□□ 0.76
MRPL55-201ENST00000295008 CD2APQ9Y5K6 639 aa19.8■□□□□ 0.76
MRPL55-201ENST00000295008 H0YIN7 160 aa19.79■□□□□ 0.76
MRPL55-201ENST00000295008 NPR1P16066 1061 aa19.79■□□□□ 0.76
MRPL55-201ENST00000295008 HOXA10P31260 410 aaPredicted RBP19.79■□□□□ 0.76
MRPL55-201ENST00000295008 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
MRPL55-201ENST00000295008 RBM17Q96I25 401 aaKnown RBP19.79■□□□□ 0.76
MRPL55-201ENST00000295008 PDZRN3Q9UPQ7 1066 aa19.79■□□□□ 0.76
MRPL55-201ENST00000295008 CACNA1SQ13698 1873 aa19.79■□□□□ 0.76
MRPL55-201ENST00000295008 MASTLQ96GX5 879 aa19.78■□□□□ 0.76
MRPL55-201ENST00000295008 ZNF594Q96JF6 807 aaPredicted RBP19.78■□□□□ 0.76
MRPL55-201ENST00000295008 CDC5LQ99459 802 aaKnown RBP19.78■□□□□ 0.76
MRPL55-201ENST00000295008 PA2G4Q9UQ80 394 aaKnown RBP19.78■□□□□ 0.76
MRPL55-201ENST00000295008 DPEP1P16444 411 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 TGFB2P61812 414 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 PTPN12Q05209 780 aaKnown RBP19.77■□□□□ 0.76
MRPL55-201ENST00000295008 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
MRPL55-201ENST00000295008 GRAPQ13588 217 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 TAF7LQ5H9L4 462 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 GRAPLQ8TC17 118 aaPredicted RBP19.77■□□□□ 0.76
MRPL55-201ENST00000295008 CELF1Q92879 486 aaKnown RBP19.77■□□□□ 0.76
MRPL55-201ENST00000295008 CRAMP1Q96RY5 1269 aa19.77■□□□□ 0.76
MRPL55-201ENST00000295008 A0A0G2JLW4 131 aa19.76■□□□□ 0.75
MRPL55-201ENST00000295008 ANKRD18AQ8IVF6 992 aa19.76■□□□□ 0.75
MRPL55-201ENST00000295008 ZNF622Q969S3 477 aaKnown RBP eCLIP19.76■□□□□ 0.75
MRPL55-201ENST00000295008 COPRSQ9NQ92 184 aa19.76■□□□□ 0.75
MRPL55-201ENST00000295008 LRRC37AA6NMS7 1700 aa19.76■□□□□ 0.75
MRPL55-201ENST00000295008 BRCA1P38398 1863 aaKnown RBP19.75■□□□□ 0.75
MRPL55-201ENST00000295008 IGHDP01880 384 aa19.75■□□□□ 0.75
MRPL55-201ENST00000295008 IGHMBP2P38935 993 aaKnown RBP19.75■□□□□ 0.75
MRPL55-201ENST00000295008 FHDC1Q9C0D6 1143 aaPredicted RBP19.75■□□□□ 0.75
MRPL55-201ENST00000295008 SIL1Q9H173 461 aa19.75■□□□□ 0.75
MRPL55-201ENST00000295008 RWDD1Q9H446 243 aaPredicted RBP19.75■□□□□ 0.75
MRPL55-201ENST00000295008 PPP4R2Q9NY27 417 aa19.75■□□□□ 0.75
MRPL55-201ENST00000295008 A0A1B0GUL6 1792 aa19.75■□□□□ 0.75
MRPL55-201ENST00000295008 KCNA3P22001 575 aa19.74■□□□□ 0.75
MRPL55-201ENST00000295008 NLGN2Q8NFZ4 835 aa19.74■□□□□ 0.75
MRPL55-201ENST00000295008 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
MRPL55-201ENST00000295008 SURF6O75683 361 aaKnown RBP19.73■□□□□ 0.75
MRPL55-201ENST00000295008 ALDH1B1P30837 517 aa19.73■□□□□ 0.75
MRPL55-201ENST00000295008 RPS8P62241 208 aaKnown RBP19.73■□□□□ 0.75
MRPL55-201ENST00000295008 CCDC136Q96JN2 1154 aa19.73■□□□□ 0.75
MRPL55-201ENST00000295008 PUS3Q9BZE2 481 aaKnown RBP19.73■□□□□ 0.75
MRPL55-201ENST00000295008 EXOC6BQ9Y2D4 811 aa19.73■□□□□ 0.75
MRPL55-201ENST00000295008 PPEF1O14829 653 aaPredicted RBP19.72■□□□□ 0.75
MRPL55-201ENST00000295008 LRRC24Q50LG9 513 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 LDHAL6AQ6ZMR3 332 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 SLC51AQ86UW1 340 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 MPHOSPH8Q99549 860 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 NOP58Q9Y2X3 529 aaKnown RBP19.72■□□□□ 0.75
MRPL55-201ENST00000295008 SLX4Q8IY92 1834 aa19.72■□□□□ 0.75
MRPL55-201ENST00000295008 EYA2O00167 538 aa19.71■□□□□ 0.75
MRPL55-201ENST00000295008 CIAO1O76071 339 aa19.71■□□□□ 0.75
MRPL55-201ENST00000295008 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.75
MRPL55-201ENST00000295008 PRPF40BQ6NWY9 871 aaKnown RBP19.71■□□□□ 0.75
MRPL55-201ENST00000295008 DCTPP1Q9H773 170 aa19.71■□□□□ 0.75
MRPL55-201ENST00000295008 BSDC1Q9NW68 430 aaPredicted RBP19.71■□□□□ 0.75
MRPL55-201ENST00000295008 BBOX1O75936 387 aa19.7■□□□□ 0.74
MRPL55-201ENST00000295008 G3BP1Q13283 466 aaKnown RBP eCLIP19.7■□□□□ 0.74
MRPL55-201ENST00000295008 OS9Q13438 667 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms