RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 TTC12Q9H892 705 aaPredicted RBP14.17□□□□□ -0.14
SLX4-201ENST00000294008 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 KIF5BP33176 963 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 KIF3CO14782 793 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 UBA7P41226 1012 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 FAM160A1Q05DH4 1040 aa14.17□□□□□ -0.14
SLX4-201ENST00000294008 TTC30AQ86WT1 665 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 JPH4Q96JJ6 628 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 ZBTB3Q9H5J0 574 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 PTGS1P23219 599 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 PDE4BQ07343 736 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 TMEM67Q5HYA8 995 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 VPS52Q8N1B4 723 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 KCNK9Q9NPC2 374 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 TMC6Q7Z403 805 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 KIAA1524Q8TCG1 905 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 FAM200AQ8TCP9 573 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 TRIM7Q9C029 511 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 SNRKQ9NRH2 765 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 FCHSD2O94868 740 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 SFMBT1Q9UHJ3 866 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 SMARCA5O60264 1052 aaPredicted RBP14.16□□□□□ -0.14
SLX4-201ENST00000294008 KRT5P13647 590 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 TCP11L2Q8N4U5 519 aa14.16□□□□□ -0.14
SLX4-201ENST00000294008 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
SLX4-201ENST00000294008 SPAG5Q96R06 1193 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 AGTPBP1Q9UPW5 1226 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 SLC26A6Q9BXS9 759 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 CLIP2Q9UDT6 1046 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 AFMP43652 599 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 ANKLE2Q86XL3 938 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 JARID2Q92833 1246 aaPredicted RBP14.15□□□□□ -0.14
SLX4-201ENST00000294008 PLVAPQ9BX97 442 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 GIPC1O14908 333 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 MICU3Q86XE3 530 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 CCDC170Q8IYT3 715 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 ZSCAN31Q96LW9 406 aaPredicted RBP14.15□□□□□ -0.14
SLX4-201ENST00000294008 NBPF6Q5VWK0 638 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
SLX4-201ENST00000294008 MIPOL1Q8TD10 442 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 NBPF4Q96M43 638 aa14.15□□□□□ -0.14
SLX4-201ENST00000294008 SEC62Q99442 399 aaKnown RBP14.15□□□□□ -0.14
SLX4-201ENST00000294008 USP37Q86T82 979 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 TNIKQ9UKE5 1360 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 ERMNQ8TAM6 284 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 SEPT8Q92599 483 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 GOLGA1Q92805 767 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 RASAL2Q9UJF2 1139 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 MYCP01106 439 aaPredicted RBP14.14□□□□□ -0.15
SLX4-201ENST00000294008 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
SLX4-201ENST00000294008 FAM114A1Q8IWE2 563 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 GOLGA6L9A6NEM1 432 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 GCC1Q96CN9 775 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 CCDC172P0C7W6 258 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 GBP7Q8N8V2 638 aaPredicted RBP14.14□□□□□ -0.15
SLX4-201ENST00000294008 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 CNTLNQ9NXG0 1405 aa14.14□□□□□ -0.15
SLX4-201ENST00000294008 PSPC1Q8WXF1 523 aaKnown RBP14.13□□□□□ -0.15
SLX4-201ENST00000294008 EXOC5O00471 708 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 PARD3BQ8TEW8 1205 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 RNF41Q9H4P4 317 aaPredicted RBP14.13□□□□□ -0.15
SLX4-201ENST00000294008 FAM170AA1A519 330 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 ATP2A1O14983 1001 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 HSPA4P34932 840 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 IFI16Q16666 785 aaKnown RBP14.13□□□□□ -0.15
SLX4-201ENST00000294008 THEMISQ8N1K5 641 aaPredicted RBP14.13□□□□□ -0.15
SLX4-201ENST00000294008 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 CCDC18Q5T9S5 1454 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
SLX4-201ENST00000294008 NSRP1Q9H0G5 558 aaKnown RBP14.13□□□□□ -0.15
SLX4-201ENST00000294008 DDX12PQ92771 950 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 AKR1B10O60218 316 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 FMNL3Q8IVF7 1028 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 PPARDQ03181 441 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 KIF18AQ8NI77 898 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 FRMD4BQ9Y2L6 1034 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 SOGA1O94964 1423 aa14.12□□□□□ -0.15
SLX4-201ENST00000294008 ESYT2A0FGR8 921 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 B4DLN1 442 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 MNAT1P51948 309 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
SLX4-201ENST00000294008 IFRD2Q12894 506 aaPredicted RBP14.11□□□□□ -0.15
SLX4-201ENST00000294008 RNF169Q8NCN4 708 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 JAG2Q9Y219 1238 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 FNDC3AQ9Y2H6 1198 aaKnown RBP14.11□□□□□ -0.15
SLX4-201ENST00000294008 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 PPP1R7Q15435 360 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 TMTC4Q5T4D3 741 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 LDHCP07864 332 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 ATRIPQ8WXE1 791 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 FNBP4Q8N3X1 1017 aaPredicted RBP14.11□□□□□ -0.15
SLX4-201ENST00000294008 STAT6P42226 847 aa14.11□□□□□ -0.15
SLX4-201ENST00000294008 SKA2Q8WVK7 121 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms