RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 ARHGAP29Q52LW3 1261 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 DNAI1Q9UI46 699 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 LIG1P18858 919 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 ERCC6LQ2NKX8 1250 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 KIF1BPQ96EK5 621 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 ZNF496Q96IT1 587 aaPredicted RBP12.86□□□□□ -0.35
ACTC1-201ENST00000290378 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
ACTC1-201ENST00000290378 TMC6Q7Z403 805 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 CCDC191Q8NCU4 936 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 DEPDC5O75140 1603 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 IQGAP1P46940 1657 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 SNRPA1P09661 255 aaKnown RBP12.86□□□□□ -0.35
ACTC1-201ENST00000290378 CHMLP26374 656 aa12.86□□□□□ -0.35
ACTC1-201ENST00000290378 EXOC5O00471 708 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 ATP2B1P20020 1258 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 CBX8Q9HC52 389 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 CCDC69A6NI79 296 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 PHACTR2O75167 634 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 SERPINC1P01008 464 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 PROSER3Q2NL68 480 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 PAXBP1Q9Y5B6 917 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 SETBP1Q9Y6X0 1596 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
ACTC1-201ENST00000290378 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
ACTC1-201ENST00000290378 KRBA2Q6ZNG9 492 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
ACTC1-201ENST00000290378 CPS1P31327 1500 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 IGSF1Q8N6C5 1336 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
ACTC1-201ENST00000290378 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
ACTC1-201ENST00000290378 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
ACTC1-201ENST00000290378 RHPN1Q8TCX5 695 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
ACTC1-201ENST00000290378 PREX1Q8TCU6 1659 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 NRXN1Q9ULB1 1477 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 A1BGP04217 495 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 PDCP20941 246 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
ACTC1-201ENST00000290378 DRC1Q96MC2 740 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 MCM6Q14566 821 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
ACTC1-201ENST00000290378 PTPRUQ92729 1446 aa12.83□□□□□ -0.35
ACTC1-201ENST00000290378 PATL2C9JE40 543 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 EIF4A1P60842 406 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 PTPN21Q16825 1174 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 RAB11FIP4Q86YS3 637 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 SLU7O95391 586 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 FAM193AP78312 1265 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
ACTC1-201ENST00000290378 KSR2Q6VAB6 950 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 KIAA0232Q92628 1395 aa12.83□□□□□ -0.36
ACTC1-201ENST00000290378 IL2RBP14784 551 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 TERF2Q15554 542 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
ACTC1-201ENST00000290378 C8orf37Q96NL8 207 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
ACTC1-201ENST00000290378 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 TBC1D2BQ9UPU7 963 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 GRM8O00222 908 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 STARD3NLO95772 234 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 CFAP100Q494V2 611 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 HSP90B2PQ58FF3 399 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 VPS37DQ86XT2 251 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 AOPEPQ8N6M6 819 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 CACTINQ8WUQ7 758 aaKnown RBP12.82□□□□□ -0.36
ACTC1-201ENST00000290378 DEF6Q9H4E7 631 aa12.82□□□□□ -0.36
ACTC1-201ENST00000290378 ZNF853P0CG23 659 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 LAMC1P11047 1609 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 ANKRD65E5RJM6 399 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 ERC1Q8IUD2 1116 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 CEP57L1Q8IYX8 460 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 TSPYL1Q9H0U9 437 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 STK38Q15208 465 aa12.81□□□□□ -0.36
ACTC1-201ENST00000290378 NAT10Q9H0A0 1025 aaKnown RBP12.81□□□□□ -0.36
ACTC1-201ENST00000290378 AK7Q96M32 723 aa12.8□□□□□ -0.36
ACTC1-201ENST00000290378 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
ACTC1-201ENST00000290378 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms