RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CNNM1Q9NRU3 951 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 LIMCH1Q9UPQ0 1083 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 LMTK3Q96Q04 1460 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 SYCE3A1L190 88 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 SLC27A2O14975 620 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 HCLS1P14317 486 aaPredicted RBP7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 VPS53Q5VIR6 699 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 BICDL1Q6ZP65 573 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 STK11IPQ8N1F8 1099 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 DDX11Q96FC9 970 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 GJB2P29033 226 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 IFIT5Q13325 482 aaKnown RBP7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 SKOR2Q2VWA4 1001 aaPredicted RBP7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 METTL24Q5JXM2 366 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 LDHAL6AQ6ZMR3 332 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 RAB11FIP4Q86YS3 637 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 MPNDQ8N594 471 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 ANO8Q9HCE9 1232 aaPredicted RBP7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 LMBRD1Q9NUN5 540 aa7.24□□□□□ -1.25
TNFSF4-201ENST00000281834 UTYO14607 1347 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 KIF1AQ12756 1690 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 LMO7Q8WWI1 1683 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 A0A0G2JLW4 131 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 H7C1W4 665 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 GADD45BO75293 160 aaPredicted RBP7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 PLCB2Q00722 1185 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 TCIRG1Q13488 830 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 RNF20Q5VTR2 975 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 CCDC191Q8NCU4 936 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 CNPY2Q9Y2B0 182 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 KDM3BQ7LBC6 1761 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 EYA2O00167 538 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 DDB1Q16531 1140 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 ME3Q16798 604 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 GPT2Q8TD30 523 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 SLC4A9Q96Q91 983 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 GREM2Q9H772 168 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 PAG1Q9NWQ8 432 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 CACNA1FO60840 1977 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 ALS2Q96Q42 1657 aa7.23□□□□□ -1.25
TNFSF4-201ENST00000281834 HIP1O00291 1037 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 SYT1P21579 422 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ATP6V1AP38606 617 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 MRE11P49959 708 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 CASP7P55210 303 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 KLHL40Q2TBA0 621 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ATG9AQ7Z3C6 839 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 DZIP3Q86Y13 1208 aaKnown RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 CCDC24Q8N4L8 307 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 TRIM44Q96DX7 344 aaPredicted RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 TPCN1Q9ULQ1 816 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ATP5JP18859 108 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 IL15P40933 162 aaPredicted RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 CEBPZQ03701 1054 aaKnown RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 RABL6Q3YEC7 729 aaPredicted RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 TTLL5Q6EMB2 1281 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 C8orf37Q96NL8 207 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 IQSEC3Q9UPP2 1182 aaPredicted RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 IRS4O14654 1257 aaPredicted RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 KCNQ2O43526 872 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 STX6O43752 255 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 IDH1O75874 414 aaKnown RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 APPP05067 770 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ITGA6P23229 1130 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 NECTIN1Q15223 517 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 FAM98CQ17RN3 349 aaKnown RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ZSCAN23Q3MJ62 389 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 ANP32BQ92688 251 aaKnown RBP7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 MAP4K1Q92918 833 aa7.22□□□□□ -1.25
TNFSF4-201ENST00000281834 TAF5LO75529 589 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 BRD1O95696 1058 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 CYP2E1P05181 493 aaPredicted RBP7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 NASPP49321 788 aaPredicted RBP7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 CCT2P78371 535 aaKnown RBP7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 CUL4AQ13619 759 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 SCARF1Q14162 830 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 CCDC158Q5M9N0 1113 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 BRF1Q92994 677 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 TTC14Q96N46 770 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 TMEM63CQ9P1W3 806 aa7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.21□□□□□ -1.25
TNFSF4-201ENST00000281834 PSMA5P28066 241 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 MCMDC2Q4G0Z9 681 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 USP48Q86UV5 1035 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 XAGE2Q96GT9 111 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 WDR33Q9C0J8 1336 aaKnown RBP7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 USP54Q70EL1 1684 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 JAK2O60674 1132 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 ZAP70P43403 619 aa7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 DNM1Q05193 864 aaKnown RBP7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 NKX1-1Q15270 411 aaPredicted RBP7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.26
TNFSF4-201ENST00000281834 FSD2A1L4K1 749 aa7.2□□□□□ -1.26
TNFSF4-201ENST00000281834 NPHP1O15259 732 aa7.2□□□□□ -1.26
TNFSF4-201ENST00000281834 CYP21A2P08686 494 aa7.2□□□□□ -1.26
TNFSF4-201ENST00000281834 GTF2E1P29083 439 aaPredicted RBP7.2□□□□□ -1.26
TNFSF4-201ENST00000281834 GUCY1B3Q02153 619 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms