RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 PRDM10Q9NQV6 1147 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
SHPRH-201ENST00000275233 TBCAO75347 108 aaKnown RBP13.64□□□□□ -0.23
SHPRH-201ENST00000275233 CALM1P0DP23 149 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 CALM2P0DP24 149 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 CALM3P0DP25 149 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 CBX1P83916 185 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 BRF1Q92994 677 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 STX1AQ16623 288 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 MCM5P33992 734 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 TRIM47Q96LD4 638 aa13.64□□□□□ -0.23
SHPRH-201ENST00000275233 CTAGE5O15320 804 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 LMAN1P49257 510 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 FAM212AQ96EL1 285 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 SPECC1Q5M775 1068 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 AKNAD1Q5T1N1 836 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
SHPRH-201ENST00000275233 CCDC174Q6PII3 467 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 MIGA1Q8NAN2 632 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 ZBTB21Q9ULJ3 1066 aa13.63□□□□□ -0.23
SHPRH-201ENST00000275233 LMBR1LQ6UX01 489 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 HDAC9Q9UKV0 1011 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 FANCAO15360 1455 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 RRAGBQ5VZM2 374 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 GIMAP6Q6P9H5 292 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 NLRP3Q96P20 1036 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 ZBTB9Q96C00 473 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 ZBTB43O43298 467 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 ADCY5O95622 1261 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 STAT6P42226 847 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 STXBP4Q6ZWJ1 553 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-201ENST00000275233 MAP9Q49MG5 647 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-201ENST00000275233 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 TFCP2L1Q9NZI6 479 aa13.62□□□□□ -0.23
SHPRH-201ENST00000275233 RNF187Q5TA31 235 aaPredicted RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 Q6ZUG5 572 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 GJC1P36383 396 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 DDB1Q16531 1140 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 RTN1Q16799 776 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 GBP3Q9H0R5 595 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 PHACTR2O75167 634 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 UTP14AQ9BVJ6 771 aaKnown RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 SP4Q02446 784 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 NFATC2IPQ8NCF5 419 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 SERPINA10Q9UK55 444 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
SHPRH-201ENST00000275233 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
SHPRH-201ENST00000275233 GCOM1H8Y6P7 765 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-201ENST00000275233 MYZAPP0CAP1 466 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 NAPAP54920 295 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 SDSP20132 328 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 KRT23Q9C075 422 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
SHPRH-201ENST00000275233 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 SYKP43405 635 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 INCENPQ9NQS7 918 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 CNPY2Q9Y2B0 182 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
SHPRH-201ENST00000275233 MAP3K9P80192 1104 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
SHPRH-201ENST00000275233 TNRQ92752 1358 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 N4BP3O15049 544 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 ARID5AQ03989 594 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 MRVI1Q9Y6F6 885 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 GRM8O00222 908 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 RXRAP19793 462 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 C8orf58Q8NAV2 365 aa13.59□□□□□ -0.23
SHPRH-201ENST00000275233 NSFL1CQ9UNZ2 370 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms