RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 BICD2Q8TD16 824 aa28.14■■■□□ 2.09
RETREG2-201ENST00000273048 EDC3Q96F86 508 aaKnown RBP28.14■■■□□ 2.09
RETREG2-201ENST00000273048 DDX19AQ9NUU7 478 aaKnown RBP28.14■■■□□ 2.09
RETREG2-201ENST00000273048 ZSCAN25Q6NSZ9 544 aa28.13■■■□□ 2.09
RETREG2-201ENST00000273048 DDX11Q96FC9 970 aa28.13■■■□□ 2.09
RETREG2-201ENST00000273048 RBM43Q6ZSC3 357 aaKnown RBP28.12■■■□□ 2.09
RETREG2-201ENST00000273048 IP6K1Q92551 441 aa28.12■■■□□ 2.09
RETREG2-201ENST00000273048 CHMP4AQ9BY43 222 aa28.12■■■□□ 2.09
RETREG2-201ENST00000273048 SNRKQ9NRH2 765 aa28.12■■■□□ 2.09
RETREG2-201ENST00000273048 ZNF165P49910 485 aa28.12■■■□□ 2.09
RETREG2-201ENST00000273048 AIMP1Q12904 312 aaKnown RBP28.12■■■□□ 2.09
RETREG2-201ENST00000273048 UTP14CQ5TAP6 766 aaKnown RBP28.12■■■□□ 2.09
RETREG2-201ENST00000273048 GRM8O00222 908 aa28.11■■■□□ 2.09
RETREG2-201ENST00000273048 PDIA4P13667 645 aaKnown RBP28.11■■■□□ 2.09
RETREG2-201ENST00000273048 MED23Q9ULK4 1368 aa28.11■■■□□ 2.09
RETREG2-201ENST00000273048 TDRD7Q8NHU6 1098 aaKnown RBP28.11■■■□□ 2.09
RETREG2-201ENST00000273048 ANKARQ7Z5J8 1434 aa28.1■■■□□ 2.09
RETREG2-201ENST00000273048 GIGYF1O75420 1035 aaPredicted RBP28.1■■■□□ 2.09
RETREG2-201ENST00000273048 AKAP4Q5JQC9 854 aa28.1■■■□□ 2.09
RETREG2-201ENST00000273048 LTN1O94822 1766 aa28.1■■■□□ 2.09
RETREG2-201ENST00000273048 NCBP1Q09161 790 aaKnown RBP28.09■■■□□ 2.09
RETREG2-201ENST00000273048 CCDC144BQ3MJ40 725 aa28.09■■■□□ 2.09
RETREG2-201ENST00000273048 CCDC144CPQ8IYA2 1237 aa28.09■■■□□ 2.09
RETREG2-201ENST00000273048 CACTINQ8WUQ7 758 aaKnown RBP28.08■■■□□ 2.09
RETREG2-201ENST00000273048 BRF1Q92994 677 aa28.08■■■□□ 2.09
RETREG2-201ENST00000273048 CLIP2Q9UDT6 1046 aa28.08■■■□□ 2.09
RETREG2-201ENST00000273048 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.08■■■□□ 2.08
RETREG2-201ENST00000273048 TNNT1P13805 278 aa28.08■■■□□ 2.08
RETREG2-201ENST00000273048 CEBPZQ03701 1054 aaKnown RBP28.07■■■□□ 2.08
RETREG2-201ENST00000273048 ALDH8A1Q9H2A2 487 aaPredicted RBP28.07■■■□□ 2.08
RETREG2-201ENST00000273048 ADGRL3Q9HAR2 1447 aa28.07■■■□□ 2.08
RETREG2-201ENST00000273048 RNMTO43148 476 aaKnown RBP28.07■■■□□ 2.08
RETREG2-201ENST00000273048 TAF5LO75529 589 aa28.07■■■□□ 2.08
RETREG2-201ENST00000273048 CHGBP05060 677 aa28.07■■■□□ 2.08
RETREG2-201ENST00000273048 NAA30Q147X3 362 aaPredicted RBP28.07■■■□□ 2.08
RETREG2-201ENST00000273048 LINS1Q8NG48 757 aa28.07■■■□□ 2.08
RETREG2-201ENST00000273048 NDUFB9Q9Y6M9 179 aa28.07■■■□□ 2.08
RETREG2-201ENST00000273048 RESTQ13127 1097 aa28.06■■■□□ 2.08
RETREG2-201ENST00000273048 BCL11BQ9C0K0 894 aaPredicted RBP28.06■■■□□ 2.08
RETREG2-201ENST00000273048 GTF3C6Q969F1 213 aa28.06■■■□□ 2.08
RETREG2-201ENST00000273048 RGPD2P0DJD1 1756 aa28.05■■■□□ 2.08
RETREG2-201ENST00000273048 COL15A1P39059 1388 aa28.05■■■□□ 2.08
RETREG2-201ENST00000273048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.05■■■□□ 2.08
RETREG2-201ENST00000273048 HDAC5Q9UQL6 1122 aa28.05■■■□□ 2.08
RETREG2-201ENST00000273048 HMG20BQ9P0W2 317 aa28.05■■■□□ 2.08
RETREG2-201ENST00000273048 SMTNL1A8MU46 457 aa28.04■■■□□ 2.08
RETREG2-201ENST00000273048 PXDNQ92626 1479 aa28.04■■■□□ 2.08
RETREG2-201ENST00000273048 PLEKHO1Q53GL0 409 aaPredicted RBP28.03■■■□□ 2.08
RETREG2-201ENST00000273048 HSP90B1P14625 803 aaKnown RBP28.03■■■□□ 2.08
RETREG2-201ENST00000273048 FOSBP53539 338 aa28.03■■■□□ 2.08
RETREG2-201ENST00000273048 ARID5BQ14865 1188 aa28.03■■■□□ 2.08
RETREG2-201ENST00000273048 TPD52L1Q16890 204 aaPredicted RBP28.03■■■□□ 2.08
RETREG2-201ENST00000273048 LRRC2Q9BYS8 371 aa28.03■■■□□ 2.08
RETREG2-201ENST00000273048 H3BQV1 296 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 TSGA10IPQ3SY00 556 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 IFFO2Q5TF58 517 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 CCDC129Q6ZRS4 1044 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 Q6ZUG5 572 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 PHF8Q9UPP1 1060 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 C11orf57Q6ZUT1 292 aaPredicted RBP28.02■■■□□ 2.08
RETREG2-201ENST00000273048 JCADQ9P266 1359 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 USP54Q70EL1 1684 aa28.02■■■□□ 2.08
RETREG2-201ENST00000273048 IGKV5-2P06315 115 aa28.01■■■□□ 2.08
RETREG2-201ENST00000273048 C1orf141Q5JVX7 400 aa28.01■■■□□ 2.08
RETREG2-201ENST00000273048 NEK1Q96PY6 1258 aa28.01■■■□□ 2.08
RETREG2-201ENST00000273048 GTPBP4Q9BZE4 634 aaKnown RBP28.01■■■□□ 2.08
RETREG2-201ENST00000273048 FTOQ9C0B1 505 aaKnown RBP eCLIP28.01■■■□□ 2.084e-13■■□□□ 13.4
RETREG2-201ENST00000273048 UTYO14607 1347 aa28.01■■■□□ 2.07
RETREG2-201ENST00000273048 A0A087WWV3 80 aa28.01■■■□□ 2.07
RETREG2-201ENST00000273048 IGSF3O75054 1194 aa28.01■■■□□ 2.07
RETREG2-201ENST00000273048 LMO7Q8WWI1 1683 aa28■■■□□ 2.07
RETREG2-201ENST00000273048 EPHA10Q5JZY3 1008 aa28■■■□□ 2.07
RETREG2-201ENST00000273048 SEC62Q99442 399 aaKnown RBP28■■■□□ 2.07
RETREG2-201ENST00000273048 ZNF592Q92610 1267 aa28■■■□□ 2.07
RETREG2-201ENST00000273048 IQCB1Q15051 598 aa27.99■■■□□ 2.07
RETREG2-201ENST00000273048 USPL1Q5W0Q7 1092 aa27.99■■■□□ 2.07
RETREG2-201ENST00000273048 CCDC112Q8NEF3 446 aa27.98■■■□□ 2.07
RETREG2-201ENST00000273048 HEG1Q9ULI3 1381 aa27.98■■■□□ 2.07
RETREG2-201ENST00000273048 USP27XA6NNY8 438 aa27.98■■■□□ 2.07
RETREG2-201ENST00000273048 RIC3Q7Z5B4 369 aa27.98■■■□□ 2.07
RETREG2-201ENST00000273048 GOLGA6L19H0YKK7 550 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 DDX58O95786 925 aaKnown RBP27.97■■■□□ 2.07
RETREG2-201ENST00000273048 SCRN1Q12765 414 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 NFAT5O94916 1531 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 KRT32Q14532 448 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 PDIA6Q15084 440 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 LRRC8AQ8IWT6 810 aa27.97■■■□□ 2.07
RETREG2-201ENST00000273048 DBNLQ9UJU6 430 aaKnown RBP27.97■■■□□ 2.07
RETREG2-201ENST00000273048 CYP21A2P08686 494 aa27.96■■■□□ 2.07
RETREG2-201ENST00000273048 GOLPH3LQ9H4A5 285 aa27.96■■■□□ 2.07
RETREG2-201ENST00000273048 DDX21Q9NR30 783 aaKnown RBP eCLIP27.96■■■□□ 2.07
RETREG2-201ENST00000273048 CFAP45Q9UL16 551 aa27.96■■■□□ 2.07
RETREG2-201ENST00000273048 PAXBP1Q9Y5B6 917 aa27.96■■■□□ 2.07
RETREG2-201ENST00000273048 PPFIA3O75145 1194 aa27.95■■■□□ 2.07
RETREG2-201ENST00000273048 MYL6BP14649 208 aa27.95■■■□□ 2.07
RETREG2-201ENST00000273048 DNAJC2Q99543 621 aaKnown RBP27.95■■■□□ 2.07
RETREG2-201ENST00000273048 CDC25BP30305 580 aa27.95■■■□□ 2.06
RETREG2-201ENST00000273048 ADD1P35611 737 aaKnown RBP27.95■■■□□ 2.06
RETREG2-201ENST00000273048 AMOTQ4VCS5 1084 aa27.95■■■□□ 2.06
RETREG2-201ENST00000273048 ESCO1Q5FWF5 840 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms