RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CEP120Q8N960 986 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 FRMD3A2A2Y4 597 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 CEP57Q86XR8 500 aa9.76□□□□□ -0.85
LDB3-201ENST00000263066 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
LDB3-201ENST00000263066 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 LCMT1Q9UIC8 334 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 CDC45O75419 566 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 CDR1P51861 262 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 TSPYL6Q8N831 410 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 GOLGA5Q8TBA6 731 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 IP6K1Q92551 441 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 KCNQ3O43525 872 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 KIAA0754O94854 1291 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 NAP1L1P55209 391 aaKnown RBP9.75□□□□□ -0.85
LDB3-201ENST00000263066 SMARCE1Q969G3 411 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
LDB3-201ENST00000263066 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
LDB3-201ENST00000263066 MARF1Q9Y4F3 1742 aaKnown RBP9.74□□□□□ -0.85
LDB3-201ENST00000263066 TRIM37O94972 964 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 NAA25Q14CX7 972 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 SRLQ86TD4 932 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.74□□□□□ -0.85
LDB3-201ENST00000263066 PIK3C2GO75747 1445 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 QRICH2Q9H0J4 1663 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 MAGEA9P43362 315 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 DDX11Q96FC9 970 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 VPS37CA5D8V6 355 aaPredicted RBP9.74□□□□□ -0.85
LDB3-201ENST00000263066 LIG3P49916 1009 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 ST5P78524 1137 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 NEUROD6Q96NK8 337 aa9.74□□□□□ -0.85
LDB3-201ENST00000263066 JPH2Q9BR39 696 aaPredicted RBP9.74□□□□□ -0.85
LDB3-201ENST00000263066 GCKP35557 465 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 TAF7Q15545 349 aaPredicted RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 ISM2Q6H9L7 571 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 NOC3LQ8WTT2 800 aaKnown RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 ARFGAP3Q9NP61 516 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 ATP6V1DQ9Y5K8 247 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 EIF3JO75822 258 aaKnown RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 SKILP12757 684 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 SMC1AQ14683 1233 aaKnown RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 MMS22LQ6ZRQ5 1243 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 PLEKHA4Q9H4M7 779 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 ZSWIM4Q9H7M6 989 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 EIF3CLB5ME19 914 aaKnown RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 ERLIN2O94905 339 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 CKAP2LQ8IYA6 745 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 EIF3CQ99613 913 aaKnown RBP9.73□□□□□ -0.85
LDB3-201ENST00000263066 MBIPQ9NS73 344 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 DDX19BQ9UMR2 479 aa9.73□□□□□ -0.85
LDB3-201ENST00000263066 ADGRL3Q9HAR2 1447 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 CCDC196A0A1B0GTZ2 297 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
LDB3-201ENST00000263066 C8orf58Q8NAV2 365 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 WDR63Q8IWG1 891 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
LDB3-201ENST00000263066 SPTLC3Q9NUV7 552 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 PPP1R12AO14974 1030 aaPredicted RBP9.72□□□□□ -0.85
LDB3-201ENST00000263066 CLNS1AP54105 237 aaKnown RBP9.72□□□□□ -0.85
LDB3-201ENST00000263066 TBC1D9Q6ZT07 1266 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 FMNL3Q8IVF7 1028 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 BICD2Q8TD16 824 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 TMX4Q9H1E5 349 aaPredicted RBP9.72□□□□□ -0.85
LDB3-201ENST00000263066 RABEP2Q9H5N1 569 aa9.72□□□□□ -0.85
LDB3-201ENST00000263066 CTIFO43310 598 aaKnown RBP9.71□□□□□ -0.85
LDB3-201ENST00000263066 SEC31AO94979 1220 aaKnown RBP9.71□□□□□ -0.85
LDB3-201ENST00000263066 DDX58O95786 925 aaKnown RBP9.71□□□□□ -0.85
LDB3-201ENST00000263066 PNMA6AP0CW24 399 aaPredicted RBP9.71□□□□□ -0.85
LDB3-201ENST00000263066 GBP2P32456 591 aaPredicted RBP9.71□□□□□ -0.85
LDB3-201ENST00000263066 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 MSL1Q68DK7 614 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 FBXO18Q8NFZ0 1043 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 TFCP2L1Q9NZI6 479 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 ARHGAP31Q2M1Z3 1444 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 FLT4P35916 1363 aa9.71□□□□□ -0.85
LDB3-201ENST00000263066 APBA3O96018 575 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 RILPL2Q969X0 211 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 MYOM2P54296 1465 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 GADD45BO75293 160 aaPredicted RBP9.71□□□□□ -0.86
LDB3-201ENST00000263066 A1BGP04217 495 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 ACTN2P35609 894 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 NAIF1Q69YI7 327 aaPredicted RBP9.71□□□□□ -0.86
LDB3-201ENST00000263066 SGSM3Q96HU1 749 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 FAM107BQ9H098 131 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 ARHGEF40Q8TER5 1519 aa9.71□□□□□ -0.86
LDB3-201ENST00000263066 AFF2P51816 1311 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 INTS3Q68E01 1043 aaKnown RBP9.7□□□□□ -0.86
LDB3-201ENST00000263066 CHD1LQ86WJ1 897 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 VEZTQ9HBM0 779 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 SETBP1Q9Y6X0 1596 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 IRF6O14896 467 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 SCP2P22307 547 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 IL13P35225 146 aa9.7□□□□□ -0.86
LDB3-201ENST00000263066 MVPQ14764 893 aaKnown RBP9.7□□□□□ -0.86
LDB3-201ENST00000263066 SYCP1Q15431 976 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms