RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 SF3B3Q15393 1217 aaKnown RBP21.21■□□□□ 0.99
CCDC94-201ENST00000262962 ANKRD44Q8N8A2 993 aa21.21■□□□□ 0.99
CCDC94-201ENST00000262962 PDZRN3Q9UPQ7 1066 aa21.21■□□□□ 0.99
CCDC94-201ENST00000262962 CRY2Q49AN0 593 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 CCDC152Q4G0S7 254 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 LMBR1LQ6UX01 489 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 C3orf67Q6ZVT6 689 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 TTLL11Q8NHH1 800 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 KIAA1551Q9HCM1 1747 aa21.2■□□□□ 0.98
CCDC94-201ENST00000262962 CD2APQ9Y5K6 639 aa21.19■□□□□ 0.98
CCDC94-201ENST00000262962 RTL9Q8NET4 1388 aa21.18■□□□□ 0.98
CCDC94-201ENST00000262962 MTX1Q13505 466 aa21.18■□□□□ 0.98
CCDC94-201ENST00000262962 SYT17Q9BSW7 474 aa21.18■□□□□ 0.98
CCDC94-201ENST00000262962 CEP85Q6P2H3 762 aa21.17■□□□□ 0.98
CCDC94-201ENST00000262962 TAF1P21675 1872 aa21.17■□□□□ 0.98
CCDC94-201ENST00000262962 TGFB2P61812 414 aa21.16■□□□□ 0.98
CCDC94-201ENST00000262962 RPAP2Q8IXW5 612 aaPredicted RBP21.16■□□□□ 0.98
CCDC94-201ENST00000262962 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
CCDC94-201ENST00000262962 GREM2Q9H772 168 aa21.16■□□□□ 0.98
CCDC94-201ENST00000262962 CHMP3Q9Y3E7 222 aa21.16■□□□□ 0.98
CCDC94-201ENST00000262962 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 H0YIN7 160 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 SRGNP10124 158 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 NPR1P16066 1061 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 ATP8B2P98198 1209 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 FAM161AQ3B820 660 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 C2CD5Q86YS7 1000 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 CCDC85AQ96PX6 553 aaPredicted RBP21.15■□□□□ 0.98
CCDC94-201ENST00000262962 SPEF2Q9C093 1822 aa21.15■□□□□ 0.98
CCDC94-201ENST00000262962 HOXA10P31260 410 aaPredicted RBP21.14■□□□□ 0.98
CCDC94-201ENST00000262962 BRCA1P38398 1863 aaKnown RBP21.14■□□□□ 0.98
CCDC94-201ENST00000262962 MASTLQ96GX5 879 aa21.14■□□□□ 0.98
CCDC94-201ENST00000262962 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.98
CCDC94-201ENST00000262962 SRGAP3O43295 1099 aa21.13■□□□□ 0.97
CCDC94-201ENST00000262962 ITGA6P23229 1130 aa21.13■□□□□ 0.97
CCDC94-201ENST00000262962 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
CCDC94-201ENST00000262962 CCDC57Q2TAC2 916 aa21.13■□□□□ 0.97
CCDC94-201ENST00000262962 ERICH6BQ5W0A0 696 aa21.13■□□□□ 0.97
CCDC94-201ENST00000262962 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
CCDC94-201ENST00000262962 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
CCDC94-201ENST00000262962 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 ANKRD18BA2A2Z9 1011 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 CHRNA5P30532 468 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 STYK1Q6J9G0 422 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 PCDHB15Q9Y5E8 787 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 POLA2Q14181 598 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 SSH3Q8TE77 659 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 CRAMP1Q96RY5 1269 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 CDC5LQ99459 802 aaKnown RBP21.12■□□□□ 0.97
CCDC94-201ENST00000262962 SEC31BQ9NQW1 1179 aa21.12■□□□□ 0.97
CCDC94-201ENST00000262962 HMMRO75330 724 aa21.11■□□□□ 0.97
CCDC94-201ENST00000262962 DPEP1P16444 411 aa21.11■□□□□ 0.97
CCDC94-201ENST00000262962 ALDH1B1P30837 517 aa21.11■□□□□ 0.97
CCDC94-201ENST00000262962 COL4A1P02462 1669 aa21.1■□□□□ 0.97
CCDC94-201ENST00000262962 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
CCDC94-201ENST00000262962 RFX5P48382 616 aaPredicted RBP21.1■□□□□ 0.97
CCDC94-201ENST00000262962 GRAPQ13588 217 aa21.1■□□□□ 0.97
CCDC94-201ENST00000262962 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
CCDC94-201ENST00000262962 GRAPLQ8TC17 118 aaPredicted RBP21.1■□□□□ 0.97
CCDC94-201ENST00000262962 ZNF622Q969S3 477 aaKnown RBP eCLIP21.1■□□□□ 0.97
CCDC94-201ENST00000262962 KCNA3P22001 575 aa21.09■□□□□ 0.97
CCDC94-201ENST00000262962 TAF7LQ5H9L4 462 aa21.09■□□□□ 0.97
CCDC94-201ENST00000262962 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
CCDC94-201ENST00000262962 CNKSR1Q969H4 720 aa21.09■□□□□ 0.97
CCDC94-201ENST00000262962 PTPN12Q05209 780 aaKnown RBP21.08■□□□□ 0.97
CCDC94-201ENST00000262962 ANKRD18AQ8IVF6 992 aa21.08■□□□□ 0.97
CCDC94-201ENST00000262962 CELF1Q92879 486 aaKnown RBP21.08■□□□□ 0.97
CCDC94-201ENST00000262962 WWC3Q9ULE0 1092 aa21.08■□□□□ 0.97
CCDC94-201ENST00000262962 SLX4Q8IY92 1834 aa21.08■□□□□ 0.96
CCDC94-201ENST00000262962 IGHMBP2P38935 993 aaKnown RBP21.07■□□□□ 0.96
CCDC94-201ENST00000262962 RPS8P62241 208 aaKnown RBP21.07■□□□□ 0.96
CCDC94-201ENST00000262962 COPRSQ9NQ92 184 aa21.07■□□□□ 0.96
CCDC94-201ENST00000262962 DCAF8L1A6NGE4 600 aa21.06■□□□□ 0.96
CCDC94-201ENST00000262962 BBOX1O75936 387 aa21.06■□□□□ 0.96
CCDC94-201ENST00000262962 ZNF594Q96JF6 807 aaPredicted RBP21.06■□□□□ 0.96
CCDC94-201ENST00000262962 FBXO3Q9UK99 471 aa21.06■□□□□ 0.96
CCDC94-201ENST00000262962 LRRC37AA6NMS7 1700 aa21.06■□□□□ 0.96
CCDC94-201ENST00000262962 HDAC1Q13547 482 aaPredicted RBP21.05■□□□□ 0.96
CCDC94-201ENST00000262962 TMC4Q7Z404 712 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 KLHDC4Q8TBB5 520 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 MPHOSPH8Q99549 860 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 BSDC1Q9NW68 430 aaPredicted RBP21.05■□□□□ 0.96
CCDC94-201ENST00000262962 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 A0A1B0GUL6 1792 aa21.05■□□□□ 0.96
CCDC94-201ENST00000262962 LDHAL6AQ6ZMR3 332 aa21.04■□□□□ 0.96
CCDC94-201ENST00000262962 RWDD1Q9H446 243 aaPredicted RBP21.04■□□□□ 0.96
CCDC94-201ENST00000262962 PA2G4Q9UQ80 394 aaKnown RBP21.04■□□□□ 0.96
CCDC94-201ENST00000262962 ARFGEF1Q9Y6D6 1849 aa21.04■□□□□ 0.96
CCDC94-201ENST00000262962 PPEF1O14829 653 aaPredicted RBP21.04■□□□□ 0.96
CCDC94-201ENST00000262962 PRPF40BQ6NWY9 871 aaKnown RBP21.04■□□□□ 0.96
CCDC94-201ENST00000262962 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
CCDC94-201ENST00000262962 CIAO1O76071 339 aa21.03■□□□□ 0.96
CCDC94-201ENST00000262962 GPR162Q16538 588 aa21.03■□□□□ 0.96
CCDC94-201ENST00000262962 EYA2O00167 538 aa21.02■□□□□ 0.96
CCDC94-201ENST00000262962 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
CCDC94-201ENST00000262962 SIL1Q9H173 461 aa21.02■□□□□ 0.96
CCDC94-201ENST00000262962 CNNM1Q9NRU3 951 aa21.02■□□□□ 0.96
CCDC94-201ENST00000262962 G3BP1Q13283 466 aaKnown RBP eCLIP21.01■□□□□ 0.95
CCDC94-201ENST00000262962 LRRC24Q50LG9 513 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms