RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NLGN2Q8NFZ4 835 aa14.73□□□□□ -0.05
PFDN1-201ENST00000261813 METTL22Q9BUU2 404 aaPredicted RBP14.73□□□□□ -0.05
PFDN1-201ENST00000261813 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
PFDN1-201ENST00000261813 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
PFDN1-201ENST00000261813 NTSR2O95665 410 aa14.73□□□□□ -0.05
PFDN1-201ENST00000261813 PARP10Q53GL7 1025 aa14.73□□□□□ -0.05
PFDN1-201ENST00000261813 CNBD1Q8NA66 436 aa14.73□□□□□ -0.05
PFDN1-201ENST00000261813 KIAA1551Q9HCM1 1747 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 F6X3S4 739 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 IGKV5-2P06315 115 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 BRPF1P55201 1214 aaPredicted RBP14.72□□□□□ -0.05
PFDN1-201ENST00000261813 TRIM28Q13263 835 aaKnown RBP14.72□□□□□ -0.05
PFDN1-201ENST00000261813 MAMSTRQ6ZN01 415 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 NUTM1Q86Y26 1132 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 DNAAF4Q8WXU2 420 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 RCAN3Q9UKA8 241 aa14.72□□□□□ -0.05
PFDN1-201ENST00000261813 ABCC12Q96J65 1359 aa14.71□□□□□ -0.05
PFDN1-201ENST00000261813 PXDNLA1KZ92 1463 aa14.71□□□□□ -0.05
PFDN1-201ENST00000261813 BCAR3O75815 825 aa14.71□□□□□ -0.06
PFDN1-201ENST00000261813 TPTE2Q6XPS3 522 aa14.71□□□□□ -0.06
PFDN1-201ENST00000261813 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.06
PFDN1-201ENST00000261813 UTP14AQ9BVJ6 771 aaKnown RBP14.71□□□□□ -0.06
PFDN1-201ENST00000261813 NYXQ9GZU5 481 aa14.71□□□□□ -0.06
PFDN1-201ENST00000261813 ANKRD31Q8N7Z5 1873 aa14.7□□□□□ -0.06
PFDN1-201ENST00000261813 NPHP1O15259 732 aa14.7□□□□□ -0.06
PFDN1-201ENST00000261813 ST5P78524 1137 aa14.7□□□□□ -0.06
PFDN1-201ENST00000261813 CWF19L2Q2TBE0 894 aaKnown RBP14.7□□□□□ -0.06
PFDN1-201ENST00000261813 ERFEQ4G0M1 354 aa14.7□□□□□ -0.06
PFDN1-201ENST00000261813 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
PFDN1-201ENST00000261813 PTPRCP08575 1304 aa14.7□□□□□ -0.06
PFDN1-201ENST00000261813 TNRC6CQ9HCJ0 1690 aaKnown RBP14.69□□□□□ -0.06
PFDN1-201ENST00000261813 TGFB2P61812 414 aa14.69□□□□□ -0.06
PFDN1-201ENST00000261813 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
PFDN1-201ENST00000261813 BRIP1Q9BX63 1249 aa14.69□□□□□ -0.06
PFDN1-201ENST00000261813 N4BP2Q86UW6 1770 aaPredicted RBP14.68□□□□□ -0.06
PFDN1-201ENST00000261813 NEURL1BA8MQ27 555 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 DPEP1P16444 411 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 GTF2E1P29083 439 aaPredicted RBP14.68□□□□□ -0.06
PFDN1-201ENST00000261813 NEXNQ0ZGT2 675 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.68□□□□□ -0.06
PFDN1-201ENST00000261813 CCDC191Q8NCU4 936 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 CWC25Q9NXE8 425 aaPredicted RBP14.68□□□□□ -0.06
PFDN1-201ENST00000261813 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
PFDN1-201ENST00000261813 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
PFDN1-201ENST00000261813 A0A0G2JLW4 131 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 KCNA3P22001 575 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 CHRNA5P30532 468 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 FBXO22Q8NEZ5 403 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 LINS1Q8NG48 757 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 FAM89AQ96GI7 184 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 MS4A4AQ96JQ5 239 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 RNF123Q5XPI4 1314 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 KIF16BQ96L93 1317 aa14.67□□□□□ -0.06
PFDN1-201ENST00000261813 COL11A2P13942 1736 aaPredicted RBP14.67□□□□□ -0.06
PFDN1-201ENST00000261813 NEFLP07196 543 aa14.66□□□□□ -0.06
PFDN1-201ENST00000261813 YBX3P16989 372 aaKnown RBP eCLIP14.66□□□□□ -0.066e-9■■□□□ 12.6
PFDN1-201ENST00000261813 RTL5Q5HYW3 569 aaPredicted RBP14.66□□□□□ -0.06
PFDN1-201ENST00000261813 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
PFDN1-201ENST00000261813 MFRPQ9BY79 579 aa14.66□□□□□ -0.06
PFDN1-201ENST00000261813 KLRG2A4D1S0 409 aaPredicted RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 PCCAP05165 728 aaPredicted RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 PDE6BP35913 854 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 IFFO2Q5TF58 517 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 C2CD5Q86YS7 1000 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 ZBTB38Q8NAP3 1195 aaPredicted RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 JARID2Q92833 1246 aaPredicted RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 WWC3Q9ULE0 1092 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 TNNQ9UQP3 1299 aa14.65□□□□□ -0.06
PFDN1-201ENST00000261813 SUPT16HQ9Y5B9 1047 aaKnown RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 GOLGB1Q14789 3259 aaKnown RBP14.65□□□□□ -0.06
PFDN1-201ENST00000261813 HCLS1P14317 486 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-201ENST00000261813 GCKRQ14397 625 aa14.64□□□□□ -0.07
PFDN1-201ENST00000261813 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
PFDN1-201ENST00000261813 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-201ENST00000261813 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-201ENST00000261813 API5Q9BZZ5 524 aaKnown RBP14.64□□□□□ -0.07
PFDN1-201ENST00000261813 SCUBE2Q9NQ36 999 aa14.64□□□□□ -0.07
PFDN1-201ENST00000261813 DLEC1Q9Y238 1755 aa14.64□□□□□ -0.07
PFDN1-201ENST00000261813 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
PFDN1-201ENST00000261813 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
PFDN1-201ENST00000261813 SRGNP10124 158 aa14.63□□□□□ -0.07
PFDN1-201ENST00000261813 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
PFDN1-201ENST00000261813 GPBP1L1Q9HC44 474 aaPredicted RBP14.63□□□□□ -0.07
PFDN1-201ENST00000261813 BRCA1P38398 1863 aaKnown RBP14.63□□□□□ -0.07
PFDN1-201ENST00000261813 LAMB2P55268 1798 aa14.63□□□□□ -0.07
PFDN1-201ENST00000261813 H0YIN7 160 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 H7C1W4 665 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 IRS4O14654 1257 aaPredicted RBP14.62□□□□□ -0.07
PFDN1-201ENST00000261813 TRIM27P14373 513 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 CASP7P55210 303 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 CRY2Q49AN0 593 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 ATF7IPQ6VMQ6 1270 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 PDZRN3Q9UPQ7 1066 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 ABCC4O15439 1325 aa14.62□□□□□ -0.07
PFDN1-201ENST00000261813 CDHR2Q9BYE9 1310 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms