RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 STX1AQ16623 288 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 TTC39AQ5SRH9 613 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 LMBR1LQ6UX01 489 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 NOL10Q9BSC4 688 aaKnown RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
PALB2-201ENST00000261584 IQSEC3Q9UPP2 1182 aaPredicted RBP11.78□□□□□ -0.52
PALB2-201ENST00000261584 CCDC66A2RUB6 948 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 GRM8O00222 908 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 COBLO75128 1261 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 LMAN1P49257 510 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 KRT222Q8N1A0 295 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 GOLGA6L1Q8N7Z2 621 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 KCNF1Q9H3M0 494 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 PIK3R4Q99570 1358 aa11.77□□□□□ -0.52
PALB2-201ENST00000261584 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
PALB2-201ENST00000261584 CUL4AQ13619 759 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 VPS53Q5VIR6 699 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 ZNF710Q8N1W2 664 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 MYL10Q9BUA6 226 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 PUF60Q9UHX1 559 aaKnown RBP11.77□□□□□ -0.53
PALB2-201ENST00000261584 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 KLF18A0A0U1RQI7 1052 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 HIP1O00291 1037 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 AKAP17AQ02040 695 aaKnown RBP11.77□□□□□ -0.53
PALB2-201ENST00000261584 LZTFL1Q9NQ48 299 aa11.77□□□□□ -0.53
PALB2-201ENST00000261584 CCDC144BQ3MJ40 725 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 LONRF3Q496Y0 759 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 CERS3Q8IU89 383 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 FAM170AA1A519 330 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 RAD21O60216 631 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
PALB2-201ENST00000261584 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 DHX8Q14562 1220 aaKnown RBP11.76□□□□□ -0.53
PALB2-201ENST00000261584 GDAP1L1Q96MZ0 367 aa11.76□□□□□ -0.53
PALB2-201ENST00000261584 GYS2P54840 703 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 SMTNL1A8MU46 457 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 UBASH3AP57075 661 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 NBPF6Q5VWK0 638 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 NBPF4Q96M43 638 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 POGZQ7Z3K3 1410 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 AFMP43652 599 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 HELBQ8NG08 1087 aaPredicted RBP11.75□□□□□ -0.53
PALB2-201ENST00000261584 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 CARD6Q9BX69 1037 aa11.75□□□□□ -0.53
PALB2-201ENST00000261584 PRR36Q9H6K5 1346 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 RPS6KB1P23443 525 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 STAMQ92783 540 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 CEP126Q9P2H0 1117 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 hCG_1642624A0A1W2PR95 340 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 CABP4P57796 275 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 CMTR1Q8N1G2 835 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 GPS2Q13227 327 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 EEF2KMTQ96G04 330 aa11.74□□□□□ -0.53
PALB2-201ENST00000261584 XPO4Q9C0E2 1151 aaKnown RBP11.74□□□□□ -0.53
PALB2-201ENST00000261584 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
PALB2-201ENST00000261584 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 AXDND1Q5T1B0 1012 aaPredicted RBP11.73□□□□□ -0.53
PALB2-201ENST00000261584 C10orf67Q8IYJ2 551 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
PALB2-201ENST00000261584 DESI2Q9BSY9 194 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 HOXC9P31274 260 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 DMTNQ08495 405 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 NCBP1Q09161 790 aaKnown RBP11.73□□□□□ -0.53
PALB2-201ENST00000261584 KRT32Q14532 448 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 SAFBQ15424 915 aaKnown RBP eCLIP11.73□□□□□ -0.53
PALB2-201ENST00000261584 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 PHKBQ93100 1093 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 CLSTN2Q9H4D0 955 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 ERCC3P19447 782 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 CAGE1Q8TC20 777 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 DDX17Q92841 729 aaKnown RBP11.73□□□□□ -0.53
PALB2-201ENST00000261584 PAXBP1Q9Y5B6 917 aa11.73□□□□□ -0.53
PALB2-201ENST00000261584 ATP7AQ04656 1500 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 RHOXF2BP0C7M4 288 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 ENOX2Q16206 610 aaKnown RBP11.72□□□□□ -0.53
PALB2-201ENST00000261584 CCDC57Q2TAC2 916 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 MRPS27Q92552 414 aaKnown RBP11.72□□□□□ -0.53
PALB2-201ENST00000261584 RHOXF2Q9BQY4 288 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 OGFRQ9NZT2 677 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 METP08581 1390 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 CCDC158Q5M9N0 1113 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 KSR2Q6VAB6 950 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms