RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 GTF2A1P52655 376 aaPredicted RBP13.43□□□□□ -0.26
PDE6B-201ENST00000255622 NMIQ13287 307 aaPredicted RBP13.43□□□□□ -0.26
PDE6B-201ENST00000255622 RIC3Q7Z5B4 369 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 NECAB1Q8N987 351 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 BOLA2Q9H3K6 86 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 DDX21Q9NR30 783 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDE6B-201ENST00000255622 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 SMC3Q9UQE7 1217 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
PDE6B-201ENST00000255622 SIPA1L3O60292 1781 aaPredicted RBP13.43□□□□□ -0.26
PDE6B-201ENST00000255622 FIBPO43427 364 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 EDC3Q96F86 508 aaKnown RBP13.42□□□□□ -0.26
PDE6B-201ENST00000255622 GPATCH3Q96I76 525 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 CT47A1Q5JQC4 288 aaPredicted RBP13.42□□□□□ -0.26
PDE6B-201ENST00000255622 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 ERBB3P21860 1342 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 C5P01031 1676 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 GJB2P29033 226 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDE6B-201ENST00000255622 ERC1Q8IUD2 1116 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 PRDM16Q9HAZ2 1276 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 NLRP2Q9NX02 1062 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 RBM8AQ9Y5S9 174 aaKnown RBP13.42□□□□□ -0.26
PDE6B-201ENST00000255622 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
PDE6B-201ENST00000255622 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
PDE6B-201ENST00000255622 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
PDE6B-201ENST00000255622 ZNF500O60304 480 aaPredicted RBP13.41□□□□□ -0.26
PDE6B-201ENST00000255622 NECTIN1Q15223 517 aa13.41□□□□□ -0.26
PDE6B-201ENST00000255622 ME3Q16798 604 aa13.41□□□□□ -0.26
PDE6B-201ENST00000255622 MYD88Q99836 296 aa13.41□□□□□ -0.26
PDE6B-201ENST00000255622 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.41□□□□□ -0.26
PDE6B-201ENST00000255622 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 F13A1P00488 732 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 CHGBP05060 677 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 COPS6Q7L5N1 327 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 YY1AP1Q9H869 796 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 NOL7Q9UMY1 257 aaKnown RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 NPHP4O75161 1426 aaPredicted RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 CREB3L3Q68CJ9 461 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 VPS53Q5VIR6 699 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
PDE6B-201ENST00000255622 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 KIF3AQ9Y496 699 aa13.4□□□□□ -0.26
PDE6B-201ENST00000255622 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
PDE6B-201ENST00000255622 UTYO14607 1347 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 DNM1Q05193 864 aaKnown RBP13.39□□□□□ -0.27
PDE6B-201ENST00000255622 FSD1Q9BTV5 496 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 SLC52A2Q9HAB3 445 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 CAMTA1Q9Y6Y1 1673 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
PDE6B-201ENST00000255622 ZNF589Q86UQ0 364 aaPredicted RBP13.39□□□□□ -0.27
PDE6B-201ENST00000255622 RAPGEF4Q8WZA2 1011 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 NPHP3Q7Z494 1330 aa13.39□□□□□ -0.27
PDE6B-201ENST00000255622 GCKRQ14397 625 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
PDE6B-201ENST00000255622 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 SLC27A2O14975 620 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 TMEM87AQ8NBN3 555 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 MTMR6Q9Y217 621 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 MEGF6O75095 1541 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 HSP90AB3PQ58FF7 597 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 MAP4K1Q92918 833 aa13.38□□□□□ -0.27
PDE6B-201ENST00000255622 PHKG2P15735 406 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 ZKSCAN1P17029 563 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 CHRNA2Q15822 529 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 HS1BP3Q53T59 392 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 ATP5J2-PTCD1G3V325 749 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 LARP1Q6PKG0 1096 aaKnown RBP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 KCNB2Q92953 911 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 MYCBPQ99417 103 aaPredicted RBP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 ZKSCAN5Q9Y2L8 839 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 U2AF2P26368 475 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDE6B-201ENST00000255622 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 CCDC183Q5T5S1 534 aa13.37□□□□□ -0.27
PDE6B-201ENST00000255622 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 UBE2HP62256 183 aa13.36□□□□□ -0.27
PDE6B-201ENST00000255622 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms