RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.69■□□□□ 0.42
PMPCB-201ENST00000249269 TOPAZ1Q8N9V7 1692 aa17.68■□□□□ 0.42
PMPCB-201ENST00000249269 ABCD1P33897 745 aa17.68■□□□□ 0.42
PMPCB-201ENST00000249269 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
PMPCB-201ENST00000249269 RPAP1Q9BWH6 1393 aaPredicted RBP17.68■□□□□ 0.42
PMPCB-201ENST00000249269 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
PMPCB-201ENST00000249269 HSP90AB2PQ58FF8 381 aa17.67■□□□□ 0.42
PMPCB-201ENST00000249269 STAG3Q9UJ98 1225 aa17.67■□□□□ 0.42
PMPCB-201ENST00000249269 PPP4CP60510 307 aa17.67■□□□□ 0.42
PMPCB-201ENST00000249269 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
PMPCB-201ENST00000249269 NUCKS1Q9H1E3 243 aaKnown RBP17.67■□□□□ 0.42
PMPCB-201ENST00000249269 ARIH1Q9Y4X5 557 aaPredicted RBP17.67■□□□□ 0.42
PMPCB-201ENST00000249269 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
PMPCB-201ENST00000249269 PPP1R12AO14974 1030 aaPredicted RBP17.66■□□□□ 0.42
PMPCB-201ENST00000249269 SKILP12757 684 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 XRN1Q8IZH2 1706 aaKnown RBP17.66■□□□□ 0.42
PMPCB-201ENST00000249269 KDRP35968 1356 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 CSB-PGBD3P0DP91 1061 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
PMPCB-201ENST00000249269 CCDC189A1A4V9 331 aa17.65■□□□□ 0.42
PMPCB-201ENST00000249269 FLT3P36888 993 aa17.65■□□□□ 0.42
PMPCB-201ENST00000249269 FBXO9Q9UK97 447 aaPredicted RBP17.65■□□□□ 0.42
PMPCB-201ENST00000249269 ERICH4A6NGS2 130 aa17.65■□□□□ 0.42
PMPCB-201ENST00000249269 CDC37Q16543 378 aaPredicted RBP17.65■□□□□ 0.42
PMPCB-201ENST00000249269 DIAPH3Q9NSV4 1193 aa17.65■□□□□ 0.42
PMPCB-201ENST00000249269 FAM208AQ9UK61 1670 aaKnown RBP17.65■□□□□ 0.42
PMPCB-201ENST00000249269 GOLGA6L6A8MZA4 724 aa17.64■□□□□ 0.42
PMPCB-201ENST00000249269 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.42
PMPCB-201ENST00000249269 NOLC1Q14978 699 aaKnown RBP eCLIP17.64■□□□□ 0.42
PMPCB-201ENST00000249269 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.42
PMPCB-201ENST00000249269 SULT6B1Q6IMI4 303 aa17.64■□□□□ 0.42
PMPCB-201ENST00000249269 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.42
PMPCB-201ENST00000249269 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
PMPCB-201ENST00000249269 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
PMPCB-201ENST00000249269 OGFOD1Q8N543 542 aa17.64■□□□□ 0.41
PMPCB-201ENST00000249269 ZSCAN31Q96LW9 406 aaPredicted RBP17.63■□□□□ 0.41
PMPCB-201ENST00000249269 CRYBG1Q9Y4K1 1723 aa17.63■□□□□ 0.41
PMPCB-201ENST00000249269 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
PMPCB-201ENST00000249269 VASPP50552 380 aaPredicted RBP17.63■□□□□ 0.41
PMPCB-201ENST00000249269 ANO2Q9NQ90 1003 aa17.63■□□□□ 0.41
PMPCB-201ENST00000249269 ABCF2Q9UG63 623 aa17.63■□□□□ 0.41
PMPCB-201ENST00000249269 NAT2P11245 290 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 LRCH2Q5VUJ6 765 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 WAPLQ7Z5K2 1190 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
PMPCB-201ENST00000249269 JADE2Q9NQC1 790 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
PMPCB-201ENST00000249269 TTC21AQ8NDW8 1320 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 RAD50Q92878 1312 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 ECM2O94769 699 aaPredicted RBP17.62■□□□□ 0.41
PMPCB-201ENST00000249269 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
PMPCB-201ENST00000249269 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 SYCP1Q15431 976 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 ICE2Q659A1 982 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 SH2B1Q9NRF2 756 aaPredicted RBP17.61■□□□□ 0.41
PMPCB-201ENST00000249269 USP42Q9H9J4 1324 aaKnown RBP17.61■□□□□ 0.41
PMPCB-201ENST00000249269 TULP2O00295 520 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 DNAJC21Q5F1R6 531 aaKnown RBP17.61■□□□□ 0.41
PMPCB-201ENST00000249269 TTC30AQ86WT1 665 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 TM6SF1Q9BZW5 370 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 LIMCH1Q9UPQ0 1083 aa17.61■□□□□ 0.41
PMPCB-201ENST00000249269 CHAF1AQ13111 956 aaPredicted RBP17.6■□□□□ 0.41
PMPCB-201ENST00000249269 JMYQ8N9B5 988 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 SSH3Q8TE77 659 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 MAP3K5Q99683 1374 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 CXorf56Q9H5V9 222 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 KIF3CO14782 793 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 GTF2A1P52655 376 aaPredicted RBP17.6■□□□□ 0.41
PMPCB-201ENST00000249269 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
PMPCB-201ENST00000249269 RSPH1Q8WYR4 309 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 TTC14Q96N46 770 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 KIF3AQ9Y496 699 aa17.6■□□□□ 0.41
PMPCB-201ENST00000249269 SREK1Q8WXA9 508 aaKnown RBP17.59■□□□□ 0.41
PMPCB-201ENST00000249269 TSPYL4Q9UJ04 414 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 DIP2AQ14689 1571 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 IPO5O00410 1097 aaKnown RBP17.59■□□□□ 0.41
PMPCB-201ENST00000249269 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 RNF214Q8ND24 703 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 WWC3Q9ULE0 1092 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 PALD1Q9ULE6 856 aa17.59■□□□□ 0.41
PMPCB-201ENST00000249269 USP6P35125 1406 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 STX6O43752 255 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 ADCY5O95622 1261 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 FBLN1P23142 703 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 C4orf46Q504U0 113 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 C1orf131Q8NDD1 294 aaKnown RBP17.58■□□□□ 0.41
PMPCB-201ENST00000249269 MNS1Q8NEH6 495 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 KCNB2Q92953 911 aa17.58■□□□□ 0.41
PMPCB-201ENST00000249269 SGSM2O43147 1006 aa17.58■□□□□ 0.4
PMPCB-201ENST00000249269 CAPN15O75808 1086 aa17.58■□□□□ 0.4
PMPCB-201ENST00000249269 IFT88Q13099 833 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms