RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 IP6K1Q92551 441 aa10.79□□□□□ -0.68
COL21A1-201ENST00000244728 ZNF213O14771 459 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 POLR3GO15318 223 aaPredicted RBP10.78□□□□□ -0.68
COL21A1-201ENST00000244728 URI1O94763 535 aaPredicted RBP10.78□□□□□ -0.68
COL21A1-201ENST00000244728 FSIP1Q8NA03 581 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 LINS1Q8NG48 757 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 BRF1Q92994 677 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 ANKIB1Q9P2G1 1089 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 STX1AQ16623 288 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 SNX14Q9Y5W7 946 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 SMTNL1A8MU46 457 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 CHL1O00533 1208 aa10.78□□□□□ -0.68
COL21A1-201ENST00000244728 BIN1O00499 593 aa10.77□□□□□ -0.68
COL21A1-201ENST00000244728 CFAP100Q494V2 611 aa10.77□□□□□ -0.68
COL21A1-201ENST00000244728 CHST3Q7LGC8 479 aa10.77□□□□□ -0.68
COL21A1-201ENST00000244728 CCAR1Q8IX12 1150 aaKnown RBP10.77□□□□□ -0.68
COL21A1-201ENST00000244728 CWC15Q9P013 229 aaKnown RBP10.77□□□□□ -0.68
COL21A1-201ENST00000244728 SOS1Q07889 1333 aaPredicted RBP10.77□□□□□ -0.68
COL21A1-201ENST00000244728 CTAGE5O15320 804 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 KCNQ3O43525 872 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
COL21A1-201ENST00000244728 SNW1Q13573 536 aaKnown RBP10.77□□□□□ -0.69
COL21A1-201ENST00000244728 PDLIM2Q96JY6 352 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 POLR3DP05423 398 aaPredicted RBP10.77□□□□□ -0.69
COL21A1-201ENST00000244728 NAP1L1P55209 391 aaKnown RBP10.77□□□□□ -0.69
COL21A1-201ENST00000244728 TMC6Q7Z403 805 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 JMYQ8N9B5 988 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 FEZ1Q99689 392 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 CCDC171Q6TFL3 1326 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 TIMM10P62072 90 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 MICU3Q86XE3 530 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 ZHX3Q9H4I2 956 aa10.77□□□□□ -0.69
COL21A1-201ENST00000244728 E9PCH4 1651 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
COL21A1-201ENST00000244728 GTF2F1P35269 517 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL21A1-201ENST00000244728 MAP3K12Q12852 859 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 CCDC43Q96MW1 224 aaKnown RBP10.76□□□□□ -0.69
COL21A1-201ENST00000244728 CEP89Q96ST8 783 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 OGFRQ9NZT2 677 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 KIF20AO95235 890 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 CAVIN2O95810 425 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 USP5P45974 858 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 C8orf76Q96K31 380 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 CALCOCO1Q9P1Z2 691 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 GOLGA8BA8MQT2 603 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 SGSM2O43147 1006 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 HSPA4P34932 840 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 NEK1Q96PY6 1258 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF652Q9Y2D9 606 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 PREX2Q70Z35 1606 aa10.76□□□□□ -0.69
COL21A1-201ENST00000244728 IFIT3O14879 490 aaKnown RBP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 GSDMDP57764 484 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 DHX8Q14562 1220 aaKnown RBP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 CLEC17AQ6ZS10 378 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 RAD50Q92878 1312 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 A1BGP04217 495 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 SSBP05455 408 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 ISM2Q6H9L7 571 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 FAM89AQ96GI7 184 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 AK7Q96M32 723 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 PYCARDQ9ULZ3 195 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 ZDHHC9Q9Y397 364 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 MAP3K5Q99683 1374 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 KIF24Q5T7B8 1368 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 BMS1Q14692 1282 aaKnown RBP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 SKIDA1Q1XH10 827 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 LEKR1Q6ZMV7 388 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 BBXQ8WY36 941 aaPredicted RBP10.75□□□□□ -0.69
COL21A1-201ENST00000244728 WWC3Q9ULE0 1092 aa10.75□□□□□ -0.69
COL21A1-201ENST00000244728 NLRP1Q9C000 1473 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 CBFA2T2O43439 604 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 LRMPQ12912 555 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 CREB3L3Q68CJ9 461 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 CBX8Q9HC52 389 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 C6orf229H3BNL8 230 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 ALDH1L1O75891 902 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 DDIT3P35638 169 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 ATP6V1AP38606 617 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 CUL4AQ13619 759 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 NOM1Q5C9Z4 860 aaKnown RBP10.74□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF790Q6PG37 636 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 ZNF397Q8NF99 534 aaPredicted RBP10.74□□□□□ -0.69
COL21A1-201ENST00000244728 IL17REQ8NFR9 667 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 C8orf37Q96NL8 207 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 TMX1Q9H3N1 280 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 MKNK2Q9HBH9 465 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 MYOM2P54296 1465 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 METP08581 1390 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 SLU7O95391 586 aaKnown RBP10.74□□□□□ -0.69
COL21A1-201ENST00000244728 SLC5A1P13866 664 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 IL2RBP14784 551 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 NMIQ13287 307 aaPredicted RBP10.74□□□□□ -0.69
COL21A1-201ENST00000244728 RUFY3Q7L099 469 aa10.74□□□□□ -0.69
COL21A1-201ENST00000244728 AOPEPQ8N6M6 819 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms