RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 BRPF3Q9ULD4 1205 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 BCL9O00512 1426 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 LOC102724428A0A0B4J2F2 783 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 TRAK2O60296 914 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 LARGE1O95461 756 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 HSPA4P34932 840 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 DDIT3P35638 169 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 SIK1P57059 783 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 NLRP10Q86W26 655 aa13.28□□□□□ -0.28
CTCFL-201ENST00000243914 RBM8AQ9Y5S9 174 aaKnown RBP13.28□□□□□ -0.28
CTCFL-201ENST00000243914 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.28
CTCFL-201ENST00000243914 IRS4O14654 1257 aaPredicted RBP13.27□□□□□ -0.28
CTCFL-201ENST00000243914 NECAB1Q8N987 351 aa13.27□□□□□ -0.28
CTCFL-201ENST00000243914 ISCA1Q9BUE6 129 aa13.27□□□□□ -0.28
CTCFL-201ENST00000243914 UBN2Q6ZU65 1347 aa13.27□□□□□ -0.28
CTCFL-201ENST00000243914 RAD50Q92878 1312 aa13.27□□□□□ -0.28
CTCFL-201ENST00000243914 ITGA6P23229 1130 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 AK2P54819 239 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 STK3Q13188 491 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 SCARF1Q14162 830 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 VPS53Q5VIR6 699 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.29
CTCFL-201ENST00000243914 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
CTCFL-201ENST00000243914 EYA2O00167 538 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 TAF5LO75529 589 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
CTCFL-201ENST00000243914 AOX1Q06278 1338 aa13.26□□□□□ -0.29
CTCFL-201ENST00000243914 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
CTCFL-201ENST00000243914 CNNM1Q9NRU3 951 aa13.26□□□□□ -0.29
CTCFL-201ENST00000243914 RAB3GAP1Q15042 981 aa13.26□□□□□ -0.29
CTCFL-201ENST00000243914 PODXL2Q9NZ53 605 aa13.26□□□□□ -0.29
CTCFL-201ENST00000243914 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
CTCFL-201ENST00000243914 IQSEC3Q9UPP2 1182 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-201ENST00000243914 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-201ENST00000243914 COL16A1Q07092 1604 aaPredicted RBP13.26□□□□□ -0.29
CTCFL-201ENST00000243914 METTL24Q5JXM2 366 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 SPATA31A5Q5VU36 1347 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 SPATA31A7Q8IWB4 1347 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 IFIT1P09914 478 aaKnown RBP13.25□□□□□ -0.29
CTCFL-201ENST00000243914 INTS5Q6P9B9 1019 aaKnown RBP13.25□□□□□ -0.29
CTCFL-201ENST00000243914 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
CTCFL-201ENST00000243914 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 ZDHHC9Q9Y397 364 aa13.25□□□□□ -0.29
CTCFL-201ENST00000243914 PHLPP1O60346 1717 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 CCDC171Q6TFL3 1326 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 ITGB4P16144 1822 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 CCDC83Q8IWF9 413 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 ZBTB38Q8NAP3 1195 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-201ENST00000243914 NIP7Q9Y221 180 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTCFL-201ENST00000243914 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 PHF14O94880 888 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 FOSBP53539 338 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 TTLL11Q8NHH1 800 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 TEX13AQ9BXU3 409 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-201ENST00000243914 NAP1L2Q9ULW6 460 aaPredicted RBP13.24□□□□□ -0.29
CTCFL-201ENST00000243914 COL15A1P39059 1388 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 XAGE2Q96GT9 111 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 USP21Q9UK80 565 aa13.24□□□□□ -0.29
CTCFL-201ENST00000243914 USP42Q9H9J4 1324 aaKnown RBP13.23□□□□□ -0.29
CTCFL-201ENST00000243914 SLC51AQ86UW1 340 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 STK11IPQ8N1F8 1099 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 CCDC87Q9NVE4 849 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 BAG4O95429 457 aaKnown RBP13.23□□□□□ -0.29
CTCFL-201ENST00000243914 ATP5JP18859 108 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
CTCFL-201ENST00000243914 WASHC4Q2M389 1173 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 PAG1Q9NWQ8 432 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 ABCC6O95255 1503 aa13.23□□□□□ -0.29
CTCFL-201ENST00000243914 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 PRPF40AO75400 957 aaKnown RBP13.22□□□□□ -0.29
CTCFL-201ENST00000243914 HAND2P61296 217 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 TTC39AQ5SRH9 613 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 PKNOX2Q96KN3 472 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 PCCAP05165 728 aaPredicted RBP13.22□□□□□ -0.29
CTCFL-201ENST00000243914 TTLL5Q6EMB2 1281 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 VSIG10Q8N0Z9 540 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
CTCFL-201ENST00000243914 SLC27A2O14975 620 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 ZAP70P43403 619 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 PDRG1Q9NUG6 133 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 TUBGCP6Q96RT7 1819 aa13.22□□□□□ -0.29
CTCFL-201ENST00000243914 CTSWP56202 376 aa13.21□□□□□ -0.29
CTCFL-201ENST00000243914 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
CTCFL-201ENST00000243914 LINC00116Q8NCU8 138 aa13.21□□□□□ -0.29
CTCFL-201ENST00000243914 GBP4Q96PP9 640 aa13.21□□□□□ -0.29
CTCFL-201ENST00000243914 ZNF609O15014 1411 aa13.2□□□□□ -0.3
CTCFL-201ENST00000243914 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
CTCFL-201ENST00000243914 ZKSCAN1P17029 563 aaPredicted RBP13.2□□□□□ -0.3
CTCFL-201ENST00000243914 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms