RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 SLC39A6Q13433 755 aa21.98■■□□□ 1.11
CHPF-201ENST00000243776 TPD52L1Q16890 204 aaPredicted RBP21.98■■□□□ 1.11
CHPF-201ENST00000243776 GRM8O00222 908 aa21.98■■□□□ 1.11
CHPF-201ENST00000243776 PDCP20941 246 aa21.98■■□□□ 1.11
CHPF-201ENST00000243776 GUCY1B3Q02153 619 aa21.98■■□□□ 1.11
CHPF-201ENST00000243776 DMTNQ08495 405 aa21.98■■□□□ 1.11
CHPF-201ENST00000243776 ERC1Q8IUD2 1116 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 KCNB2Q92953 911 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 SCAND2PQ9GZW5 306 aaPredicted RBP21.97■■□□□ 1.11
CHPF-201ENST00000243776 NWD1Q149M9 1564 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 EPHA10Q5JZY3 1008 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 RNF20Q5VTR2 975 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 BABAM1Q9NWV8 329 aa21.97■■□□□ 1.11
CHPF-201ENST00000243776 PIK3C2AO00443 1686 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 TOPAZ1Q8N9V7 1692 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
CHPF-201ENST00000243776 CLSTN2Q9H4D0 955 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 Q6ZUG5 572 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 CEMIPQ8WUJ3 1361 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 PLEKHG1Q9ULL1 1385 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 TPM3P06753 285 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 MTX1Q13505 466 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 FILIP1Q7Z7B0 1213 aa21.96■■□□□ 1.11
CHPF-201ENST00000243776 TRMT1Q9NXH9 659 aaKnown RBP21.96■■□□□ 1.11
CHPF-201ENST00000243776 USP27XA6NNY8 438 aa21.95■■□□□ 1.1
CHPF-201ENST00000243776 NCBP1Q09161 790 aaKnown RBP21.95■■□□□ 1.1
CHPF-201ENST00000243776 C11orf57Q6ZUT1 292 aaPredicted RBP21.95■■□□□ 1.1
CHPF-201ENST00000243776 C1orf141Q5JVX7 400 aa21.95■■□□□ 1.1
CHPF-201ENST00000243776 DIP2BQ9P265 1576 aa21.95■■□□□ 1.1
CHPF-201ENST00000243776 NPHP3Q7Z494 1330 aa21.95■■□□□ 1.1
CHPF-201ENST00000243776 NPHP1O15259 732 aa21.94■■□□□ 1.1
CHPF-201ENST00000243776 USP16Q9Y5T5 823 aa21.94■■□□□ 1.1
CHPF-201ENST00000243776 CACNA1FO60840 1977 aa21.94■■□□□ 1.1
CHPF-201ENST00000243776 CCT2P78371 535 aaKnown RBP21.94■■□□□ 1.1
CHPF-201ENST00000243776 IP6K1Q92551 441 aa21.94■■□□□ 1.1
CHPF-201ENST00000243776 SYTL4Q96C24 671 aaPredicted RBP21.94■■□□□ 1.1
CHPF-201ENST00000243776 TAF5LO75529 589 aa21.93■■□□□ 1.1
CHPF-201ENST00000243776 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
CHPF-201ENST00000243776 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
CHPF-201ENST00000243776 CHST3Q7LGC8 479 aa21.93■■□□□ 1.1
CHPF-201ENST00000243776 DDX19AQ9NUU7 478 aaKnown RBP21.93■■□□□ 1.1
CHPF-201ENST00000243776 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
CHPF-201ENST00000243776 NPHP4O75161 1426 aaPredicted RBP21.93■■□□□ 1.1
CHPF-201ENST00000243776 ELP1O95163 1332 aa21.93■■□□□ 1.1
CHPF-201ENST00000243776 ALDH1L1O75891 902 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 PLA2G4DQ86XP0 818 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 IGKV5-2P06315 115 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 ANKRD1Q15327 319 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 ANKRD7Q92527 254 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 NEK1Q96PY6 1258 aa21.92■■□□□ 1.1
CHPF-201ENST00000243776 NCOA5Q9HCD5 579 aaKnown RBP21.92■■□□□ 1.1
CHPF-201ENST00000243776 COL15A1P39059 1388 aa21.91■■□□□ 1.1
CHPF-201ENST00000243776 GOLGA6L19H0YKK7 550 aa21.91■■□□□ 1.1
CHPF-201ENST00000243776 AKAP4Q5JQC9 854 aa21.91■■□□□ 1.1
CHPF-201ENST00000243776 MYD88Q99836 296 aa21.91■■□□□ 1.1
CHPF-201ENST00000243776 PLEKHO1Q53GL0 409 aaPredicted RBP21.91■■□□□ 1.1
CHPF-201ENST00000243776 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
CHPF-201ENST00000243776 HIP1O00291 1037 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 PSME1Q06323 249 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 CTIFO43310 598 aaKnown RBP21.9■■□□□ 1.1
CHPF-201ENST00000243776 TFCP2Q12800 502 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 RESTQ13127 1097 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 CCDC112Q8NEF3 446 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 GTF3C6Q969F1 213 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 DBNLQ9UJU6 430 aaKnown RBP21.9■■□□□ 1.1
CHPF-201ENST00000243776 DIP2AQ14689 1571 aa21.9■■□□□ 1.1
CHPF-201ENST00000243776 SCRN1Q12765 414 aa21.89■■□□□ 1.1
CHPF-201ENST00000243776 CCAR1Q8IX12 1150 aaKnown RBP21.89■■□□□ 1.1
CHPF-201ENST00000243776 TDRD7Q8NHU6 1098 aaKnown RBP21.89■■□□□ 1.1
CHPF-201ENST00000243776 CYP21A2P08686 494 aa21.89■■□□□ 1.09
CHPF-201ENST00000243776 HOXB7P09629 217 aa21.89■■□□□ 1.09
CHPF-201ENST00000243776 GOLPH3LQ9H4A5 285 aa21.89■■□□□ 1.09
CHPF-201ENST00000243776 UBR1Q8IWV7 1749 aa21.89■■□□□ 1.09
CHPF-201ENST00000243776 ATP5J2-PTCD1G3V325 749 aa21.88■■□□□ 1.09
CHPF-201ENST00000243776 PTCD1O75127 700 aaKnown RBP21.88■■□□□ 1.09
CHPF-201ENST00000243776 APOBRQ0VD83 1088 aa21.88■■□□□ 1.09
CHPF-201ENST00000243776 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
CHPF-201ENST00000243776 BECN2A8MW95 431 aa21.88■■□□□ 1.09
CHPF-201ENST00000243776 DBNDD2Q9BQY9 259 aa21.88■■□□□ 1.09
CHPF-201ENST00000243776 XAGE3Q8WTP9 111 aa21.87■■□□□ 1.09
CHPF-201ENST00000243776 COPS6Q7L5N1 327 aa21.87■■□□□ 1.09
CHPF-201ENST00000243776 CEP135Q66GS9 1140 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 STOX1Q6ZVD7 989 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 MED23Q9ULK4 1368 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 SMTNL1A8MU46 457 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 OTUD7BQ6GQQ9 843 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 RAB11FIP4Q86YS3 637 aa21.86■■□□□ 1.09
CHPF-201ENST00000243776 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 USP28Q96RU2 1077 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 SKILP12757 684 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 PXDNQ92626 1479 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 DDX58O95786 925 aaKnown RBP21.85■■□□□ 1.09
CHPF-201ENST00000243776 ME1P48163 572 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 IQCB1Q15051 598 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 UBE3BQ7Z3V4 1068 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 LRRC8AQ8IWT6 810 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms