RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 KCNQ3O43525 872 aa17.34■□□□□ 0.37
TNFSF11-201ENST00000239849 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
TNFSF11-201ENST00000239849 PPP1R42Q7Z4L9 355 aa17.34■□□□□ 0.37
TNFSF11-201ENST00000239849 TBC1D10BQ4KMP7 808 aaPredicted RBP17.33■□□□□ 0.36
TNFSF11-201ENST00000239849 MAP3K15Q6ZN16 1313 aa17.32■□□□□ 0.36
TNFSF11-201ENST00000239849 PRAMEF22A3QJZ6 481 aa17.32■□□□□ 0.36
TNFSF11-201ENST00000239849 FKTNO75072 461 aa17.32■□□□□ 0.36
TNFSF11-201ENST00000239849 TBC1D8O95759 1140 aa17.32■□□□□ 0.36
TNFSF11-201ENST00000239849 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
TNFSF11-201ENST00000239849 PARP10Q53GL7 1025 aa17.31■□□□□ 0.36
TNFSF11-201ENST00000239849 DLK2Q6UY11 383 aa17.31■□□□□ 0.36
TNFSF11-201ENST00000239849 ABCC4O15439 1325 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 TM4SF4P48230 202 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 SUSD4Q5VX71 490 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 CDCA5Q96FF9 252 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
TNFSF11-201ENST00000239849 YDJCA8MPS7 323 aa17.29■□□□□ 0.36
TNFSF11-201ENST00000239849 NTSR2O95665 410 aa17.29■□□□□ 0.36
TNFSF11-201ENST00000239849 GPTP24298 496 aa17.29■□□□□ 0.36
TNFSF11-201ENST00000239849 KIF4BQ2VIQ3 1234 aa17.29■□□□□ 0.36
TNFSF11-201ENST00000239849 UBN2Q6ZU65 1347 aa17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 PSMD14O00487 310 aa17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 GGA3Q9NZ52 723 aa17.28■□□□□ 0.36
TNFSF11-201ENST00000239849 ALDH1A1P00352 501 aa17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 SLC51AQ86UW1 340 aa17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 ZNF34Q8IZ26 560 aa17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 SLC17A8Q8NDX2 589 aa17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 COLQQ9Y215 455 aaPredicted RBP17.27■□□□□ 0.36
TNFSF11-201ENST00000239849 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
TNFSF11-201ENST00000239849 NGEFQ8N5V2 710 aa17.26■□□□□ 0.35
TNFSF11-201ENST00000239849 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 EGFRP00533 1210 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 NECTIN2Q92692 538 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 UTP14AQ9BVJ6 771 aaKnown RBP17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
TNFSF11-201ENST00000239849 GRAPQ13588 217 aa17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 GRAPLQ8TC17 118 aaPredicted RBP17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 EYA3Q99504 573 aa17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
TNFSF11-201ENST00000239849 PITPNM2Q9BZ72 1349 aa17.23■□□□□ 0.35
TNFSF11-201ENST00000239849 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
TNFSF11-201ENST00000239849 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
TNFSF11-201ENST00000239849 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
TNFSF11-201ENST00000239849 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
TNFSF11-201ENST00000239849 TMEM106CQ9BVX2 250 aa17.22■□□□□ 0.35
TNFSF11-201ENST00000239849 DBNDD1Q9H9R9 158 aa17.22■□□□□ 0.35
TNFSF11-201ENST00000239849 NF2P35240 595 aa17.21■□□□□ 0.35
TNFSF11-201ENST00000239849 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
TNFSF11-201ENST00000239849 TTLL7Q6ZT98 887 aa17.21■□□□□ 0.35
TNFSF11-201ENST00000239849 RRP7AQ9Y3A4 280 aaKnown RBP17.21■□□□□ 0.35
TNFSF11-201ENST00000239849 ECE2O60344 883 aa17.2■□□□□ 0.34
TNFSF11-201ENST00000239849 INHBEP58166 350 aa17.2■□□□□ 0.34
TNFSF11-201ENST00000239849 TAF7Q15545 349 aaPredicted RBP17.2■□□□□ 0.34
TNFSF11-201ENST00000239849 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
TNFSF11-201ENST00000239849 ERBB4Q15303 1308 aa17.2■□□□□ 0.34
TNFSF11-201ENST00000239849 NUP98P52948 1817 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 SCARF1Q14162 830 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 MCM10Q7L590 875 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 OTOP1Q7RTM1 612 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 ARMC5Q96C12 935 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 ERO1AQ96HE7 468 aa17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 RBBP6Q7Z6E9 1792 aaKnown RBP17.19■□□□□ 0.34
TNFSF11-201ENST00000239849 UBE2Q2LH0YL09 131 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 VIL1P09327 827 aaKnown RBP17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 MYL6BP14649 208 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 EN2P19622 333 aaPredicted RBP17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 PHACTR3Q96KR7 559 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 DUOX1Q9NRD9 1551 aa17.18■□□□□ 0.34
TNFSF11-201ENST00000239849 G3V3G9 751 aa17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 ZNF609O15014 1411 aa17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 RIMBP2O15034 1052 aa17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 HSP90AB3PQ58FF7 597 aa17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 DCAF8Q5TAQ9 597 aa17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
TNFSF11-201ENST00000239849 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
TNFSF11-201ENST00000239849 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
TNFSF11-201ENST00000239849 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
TNFSF11-201ENST00000239849 ARMC9Q7Z3E5 817 aa17.15■□□□□ 0.34
TNFSF11-201ENST00000239849 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
TNFSF11-201ENST00000239849 OTUD5Q96G74 571 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms