RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 EP400NLQ6ZTU2 488 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 PRPF31Q8WWY3 499 aaKnown RBP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 PTGS1P23219 599 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 HSP90AA4PQ58FG1 418 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 MAP3K2Q9Y2U5 619 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 AKNAQ7Z591 1439 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 SMIM23A6NLE4 172 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 GTF2F1P35269 517 aaKnown RBP eCLIP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 SPAG5Q96R06 1193 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 GMNNO75496 209 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 GABPAQ06546 454 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 STX1AQ16623 288 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 CCDC65Q8IXS2 484 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
YIPF4-201ENST00000238831 CWC25Q9NXE8 425 aaPredicted RBP9.89□□□□□ -0.83
YIPF4-201ENST00000238831 SH2B1Q9NRF2 756 aaPredicted RBP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 FAM169AQ9Y6X4 670 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 SMARCC2Q8TAQ2 1214 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 ZBTB9Q96C00 473 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 CEP83Q9Y592 693 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 V9GYY5 206 aaPredicted RBP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 NOL3O60936 208 aaKnown RBP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 IL27Q8NEV9 243 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 ZNF408Q9H9D4 720 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 NOD1Q9Y239 953 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 AKR1B10O60218 316 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 EPSTI1Q96J88 318 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 N4BP3O15049 544 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 CFAP157Q5JU67 520 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 CCDC14Q49A88 953 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 SMC6Q96SB8 1091 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 TMCO4Q5TGY1 634 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 RPUSD2Q8IZ73 545 aaKnown RBP9.88□□□□□ -0.83
YIPF4-201ENST00000238831 RNF34Q969K3 372 aa9.88□□□□□ -0.83
YIPF4-201ENST00000238831 B4DLN1 442 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 MRPL12P52815 198 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 AMOTQ4VCS5 1084 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 SELENOSQ9BQE4 189 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 FOXO3O43524 673 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 MKRN1Q9UHC7 482 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 RRAGBQ5VZM2 374 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 NSRP1Q9H0G5 558 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 POTEB2H3BUK9 544 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 TMPOP42166 694 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 PPP2R5CQ13362 524 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 CGNQ9P2M7 1197 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 NAIPQ13075 1403 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 SNW1Q13573 536 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 PYM1Q9BRP8 204 aaKnown RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 GJB2P29033 226 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 MCM4P33991 863 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 WTAPQ15007 396 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 KMT5BQ4FZB7 885 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 CCDC152Q4G0S7 254 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 WAPLQ7Z5K2 1190 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 PPP1R9BQ96SB3 815 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 ORC3Q9UBD5 711 aaPredicted RBP9.87□□□□□ -0.83
YIPF4-201ENST00000238831 CUL4BQ13620 913 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 KANK3Q6NY19 840 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 CCDC25Q86WR0 208 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 GDPD2Q9HCC8 539 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 C6orf50Q9HD87 102 aa9.87□□□□□ -0.83
YIPF4-201ENST00000238831 CCDC114Q96M63 670 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 HARSP12081 509 aaKnown RBP9.86□□□□□ -0.83
YIPF4-201ENST00000238831 SPOUT1Q5T280 376 aaKnown RBP9.86□□□□□ -0.83
YIPF4-201ENST00000238831 GJA3Q9Y6H8 435 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 CYP7A1P22680 504 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 SPDYE3A6NKU9 549 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 NAPAP54920 295 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 ATP2A1O14983 1001 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 FCHSD2O94868 740 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 HSPA4P34932 840 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 RMND1Q9NWS8 449 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 NSD3Q9BZ95 1437 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
YIPF4-201ENST00000238831 POLD1P28340 1107 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 UAP1Q16222 522 aaPredicted RBP9.86□□□□□ -0.83
YIPF4-201ENST00000238831 BACH1O14867 736 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 RAPGEF3O95398 923 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 NCOA7Q8NI08 942 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 DNAAF4Q8WXU2 420 aa9.86□□□□□ -0.83
YIPF4-201ENST00000238831 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
YIPF4-201ENST00000238831 NACA2Q9H009 215 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 ESPNB1AK53 854 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 USP25Q9UHP3 1055 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 RIMBP2O15034 1052 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 NBPF7P0C2Y1 421 aaPredicted RBP9.85□□□□□ -0.83
YIPF4-201ENST00000238831 GNG11P61952 73 aa9.85□□□□□ -0.83
YIPF4-201ENST00000238831 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms