RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
TTC1-201ENST00000231238 PPP1R18Q6NYC8 613 aa12.33□□□□□ -0.44
TTC1-201ENST00000231238 SLC52A2Q9HAB3 445 aa12.33□□□□□ -0.44
TTC1-201ENST00000231238 TNNQ9UQP3 1299 aa12.33□□□□□ -0.44
TTC1-201ENST00000231238 SLC27A5Q9Y2P5 690 aa12.33□□□□□ -0.44
TTC1-201ENST00000231238 PARP4Q9UKK3 1724 aaKnown RBP12.32□□□□□ -0.44
TTC1-201ENST00000231238 CYP27B1O15528 508 aa12.32□□□□□ -0.44
TTC1-201ENST00000231238 RLBP1P12271 317 aa12.32□□□□□ -0.44
TTC1-201ENST00000231238 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
TTC1-201ENST00000231238 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
TTC1-201ENST00000231238 TMEM57Q8N5G2 664 aa12.31□□□□□ -0.44
TTC1-201ENST00000231238 NFATC2IPQ8NCF5 419 aa12.31□□□□□ -0.44
TTC1-201ENST00000231238 HLA-CQ95604 372 aa12.31□□□□□ -0.44
TTC1-201ENST00000231238 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
TTC1-201ENST00000231238 PTPRCP08575 1304 aa12.3□□□□□ -0.44
TTC1-201ENST00000231238 EXOC5O00471 708 aa12.3□□□□□ -0.44
TTC1-201ENST00000231238 THAP11Q96EK4 314 aa12.3□□□□□ -0.44
TTC1-201ENST00000231238 HOXB7P09629 217 aa12.29□□□□□ -0.44
TTC1-201ENST00000231238 CDCA7Q9BWT1 371 aaPredicted RBP12.29□□□□□ -0.44
TTC1-201ENST00000231238 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
TTC1-201ENST00000231238 KCNQ3O43525 872 aa12.28□□□□□ -0.44
TTC1-201ENST00000231238 MYT1Q01538 1121 aa12.28□□□□□ -0.44
TTC1-201ENST00000231238 SLC39A6Q13433 755 aa12.28□□□□□ -0.44
TTC1-201ENST00000231238 FKBP5Q13451 457 aaPredicted RBP12.28□□□□□ -0.44
TTC1-201ENST00000231238 ZNF790Q6PG37 636 aa12.28□□□□□ -0.44
TTC1-201ENST00000231238 CENPQQ7L2Z9 268 aaPredicted RBP12.28□□□□□ -0.44
TTC1-201ENST00000231238 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
TTC1-201ENST00000231238 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
TTC1-201ENST00000231238 ERVV-2B6SEH9 535 aa12.27□□□□□ -0.44
TTC1-201ENST00000231238 HOXA2O43364 376 aa12.27□□□□□ -0.44
TTC1-201ENST00000231238 SLC4A10Q6U841 1118 aa12.27□□□□□ -0.44
TTC1-201ENST00000231238 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.27□□□□□ -0.44
TTC1-201ENST00000231238 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.44
TTC1-201ENST00000231238 ADH1BP00325 375 aa12.27□□□□□ -0.45
TTC1-201ENST00000231238 FLIIQ13045 1269 aa12.27□□□□□ -0.45
TTC1-201ENST00000231238 FMNL2Q96PY5 1086 aa12.27□□□□□ -0.45
TTC1-201ENST00000231238 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
TTC1-201ENST00000231238 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.45
TTC1-201ENST00000231238 TMOD3Q9NYL9 352 aa12.27□□□□□ -0.45
TTC1-201ENST00000231238 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 HSPA1LP34931 641 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 USP46P62068 366 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 DDB1Q16531 1140 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 GRIPAP1Q4V328 841 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 SPIRE2Q8WWL2 714 aa12.26□□□□□ -0.45
TTC1-201ENST00000231238 ABCC4O15439 1325 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
TTC1-201ENST00000231238 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 RNF19BQ6ZMZ0 732 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 SYTL4Q96C24 671 aaPredicted RBP12.25□□□□□ -0.45
TTC1-201ENST00000231238 SPSB2Q99619 263 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
TTC1-201ENST00000231238 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
TTC1-201ENST00000231238 KDM3BQ7LBC6 1761 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 S1PR4O95977 384 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 SNRPA1P09661 255 aaKnown RBP12.24□□□□□ -0.45
TTC1-201ENST00000231238 CCT4P50991 539 aaKnown RBP12.24□□□□□ -0.45
TTC1-201ENST00000231238 G2E3Q7L622 706 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 SCN11AQ9UI33 1791 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
TTC1-201ENST00000231238 RGS20O76081 388 aa12.23□□□□□ -0.45
TTC1-201ENST00000231238 FAM160A2Q8N612 972 aaPredicted RBP12.23□□□□□ -0.45
TTC1-201ENST00000231238 ZNF496Q96IT1 587 aaPredicted RBP12.23□□□□□ -0.45
TTC1-201ENST00000231238 USP21Q9UK80 565 aa12.23□□□□□ -0.45
TTC1-201ENST00000231238 MRC1P22897 1456 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 VIRMAQ69YN4 1812 aaKnown RBP12.22□□□□□ -0.45
TTC1-201ENST00000231238 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 F6X3S4 739 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
TTC1-201ENST00000231238 HYPKQ9NX55 129 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 SLIT2O94813 1529 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 ADAMTS7Q9UKP4 1686 aa12.22□□□□□ -0.45
TTC1-201ENST00000231238 PPEF1O14829 653 aaPredicted RBP12.21□□□□□ -0.45
TTC1-201ENST00000231238 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
TTC1-201ENST00000231238 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
TTC1-201ENST00000231238 VPS72Q15906 364 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
TTC1-201ENST00000231238 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
TTC1-201ENST00000231238 ZBTB40Q9NUA8 1239 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 PCDHB15Q9Y5E8 787 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 DISP2A7MBM2 1401 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 TNS2Q63HR2 1409 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.45
TTC1-201ENST00000231238 ANXA1P04083 346 aa12.21□□□□□ -0.46
TTC1-201ENST00000231238 MYL6BP14649 208 aa12.21□□□□□ -0.46
TTC1-201ENST00000231238 SLC6A16Q9GZN6 736 aa12.21□□□□□ -0.46
TTC1-201ENST00000231238 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 MOXD2PA6NHM9 499 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
TTC1-201ENST00000231238 IGHDP01880 384 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 NDUFV2P19404 249 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
TTC1-201ENST00000231238 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
TTC1-201ENST00000231238 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms