RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
PRKAB1-201ENST00000229328 NUCB2P80303 420 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 ZNF589Q86UQ0 364 aaPredicted RBP17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 TBC1D2BQ9UPU7 963 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 HAUS7Q99871 368 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 MED23Q9ULK4 1368 aa17.39■□□□□ 0.37
PRKAB1-201ENST00000229328 TOM1O60784 492 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 CCDC57Q2TAC2 916 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 LARP6Q9BRS8 491 aaKnown RBP17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 CIAO1O76071 339 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 CLEC17AQ6ZS10 378 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 KCNB2Q92953 911 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 SLIT2O94813 1529 aa17.38■□□□□ 0.37
PRKAB1-201ENST00000229328 CSF1RP07333 972 aa17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 AK2P54819 239 aa17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 DZIP3Q86Y13 1208 aaKnown RBP17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 ZNF609O15014 1411 aa17.37■□□□□ 0.37
PRKAB1-201ENST00000229328 IL6STP40189 918 aaPredicted RBP17.36■□□□□ 0.37
PRKAB1-201ENST00000229328 COL9A3Q14050 684 aaPredicted RBP17.36■□□□□ 0.37
PRKAB1-201ENST00000229328 CREB3L3Q68CJ9 461 aa17.36■□□□□ 0.37
PRKAB1-201ENST00000229328 A0A1B0GUL7 405 aa17.36■□□□□ 0.37
PRKAB1-201ENST00000229328 JAKMIP1Q96N16 626 aaKnown RBP17.36■□□□□ 0.37
PRKAB1-201ENST00000229328 KCNJ4P48050 445 aa17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 INTS5Q6P9B9 1019 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 RUFY3Q7L099 469 aa17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 HSP90AB3PQ58FF7 597 aa17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
PRKAB1-201ENST00000229328 SLC27A2O14975 620 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 ATP6V1AP38606 617 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 BARGINQ6ZT62 677 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 UBN2Q6ZU65 1347 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 GOLIM4O00461 696 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 KCNQ2O43526 872 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 TAF5LO75529 589 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 ITPK1Q13572 414 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 TTLL11Q8NHH1 800 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 GREM2Q9H772 168 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 ZSWIM6Q9HCJ5 1215 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 NUP98P52948 1817 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 NWD2Q9ULI1 1742 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 JCADQ9P266 1359 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 LOC102724428A0A0B4J2F2 783 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 SIK1P57059 783 aa17.34■□□□□ 0.37
PRKAB1-201ENST00000229328 ANKRD36CQ5JPF3 1778 aa17.33■□□□□ 0.37
PRKAB1-201ENST00000229328 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 CRKLP46109 303 aaKnown RBP17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 KBTBD3Q8NAB2 608 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 ADORA1P30542 326 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 FAM98CQ17RN3 349 aaKnown RBP17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 MCTP1Q6DN14 999 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
PRKAB1-201ENST00000229328 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 LARGE1O95461 756 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 ITGA6P23229 1130 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 CTSWP56202 376 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 ZNF34Q8IZ26 560 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 PDRG1Q9NUG6 133 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 LIMCH1Q9UPQ0 1083 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
PRKAB1-201ENST00000229328 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 CYP46A1Q9Y6A2 500 aa17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
PRKAB1-201ENST00000229328 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 RPAP1Q9BWH6 1393 aaPredicted RBP17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 XAGE2Q96GT9 111 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 RIPOR2Q9Y4F9 1068 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 BRD1O95696 1058 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 MCMDC2Q4G0Z9 681 aa17.3■□□□□ 0.36
PRKAB1-201ENST00000229328 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
PRKAB1-201ENST00000229328 DTNBO60941 627 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms