RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 STK32BQ9NY57 414 aa21.35■■□□□ 1.01
CLIP2-201ENST00000223398 SBNO2Q9Y2G9 1366 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
CLIP2-201ENST00000223398 NECAB1Q8N987 351 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 ARHGAP45Q92619 1136 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 GJA3Q9Y6H8 435 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 ATP8B2P98198 1209 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 EIF4G3O43432 1585 aaKnown RBP21.34■■□□□ 1.01
CLIP2-201ENST00000223398 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 SDSP20132 328 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 BMP2KLQ5H9B9 411 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 VTI1AQ96AJ9 217 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 FAM89AQ96GI7 184 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 CENPHQ9H3R5 247 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 BRPF3Q9ULD4 1205 aa21.34■■□□□ 1.01
CLIP2-201ENST00000223398 ESR2Q92731 530 aa21.33■■□□□ 1.01
CLIP2-201ENST00000223398 CCDC24Q8N4L8 307 aa21.33■■□□□ 1.01
CLIP2-201ENST00000223398 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
CLIP2-201ENST00000223398 HEATR3Q7Z4Q2 680 aa21.33■■□□□ 1
CLIP2-201ENST00000223398 ZFYP08048 801 aaPredicted RBP21.33■■□□□ 1
CLIP2-201ENST00000223398 TCERG1LQ5VWI1 586 aa21.33■■□□□ 1
CLIP2-201ENST00000223398 CNBD1Q8NA66 436 aa21.33■■□□□ 1
CLIP2-201ENST00000223398 TFCP2Q12800 502 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 ISM2Q6H9L7 571 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 KRT23Q9C075 422 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 PAG1Q9NWQ8 432 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 ARHGAP29Q52LW3 1261 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 TAF4BQ92750 862 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 PDE1AP54750 535 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 MCM9Q9NXL9 1143 aa21.32■■□□□ 1
CLIP2-201ENST00000223398 UBA7P41226 1012 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 MAGEB6Q8N7X4 407 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 HMG20BQ9P0W2 317 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 NF2P35240 595 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 CPLX3Q8WVH0 158 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 ANO10Q9NW15 660 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 NUP160Q12769 1436 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 HCLS1P14317 486 aaPredicted RBP21.31■■□□□ 1
CLIP2-201ENST00000223398 PRIM1P49642 420 aaKnown RBP21.31■■□□□ 1
CLIP2-201ENST00000223398 SEPT7Q16181 437 aaKnown RBP21.31■■□□□ 1
CLIP2-201ENST00000223398 MCMDC2Q4G0Z9 681 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 ZBTB43O43298 467 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 CTTNBP2Q8WZ74 1663 aa21.31■■□□□ 1
CLIP2-201ENST00000223398 ANKRD44Q8N8A2 993 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 SLAIN2Q9P270 581 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 DNA2P51530 1060 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 USP21Q9UK80 565 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 RBM8AQ9Y5S9 174 aaKnown RBP21.3■■□□□ 1
CLIP2-201ENST00000223398 SYCP3Q8IZU3 236 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 PCDHB15Q9Y5E8 787 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 USP8P40818 1118 aa21.3■■□□□ 1
CLIP2-201ENST00000223398 NUCB1Q02818 461 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 ATP10AO60312 1499 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 RBM17Q96I25 401 aaKnown RBP21.29■■□□□ 1
CLIP2-201ENST00000223398 STX6O43752 255 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 CCDC150Q8NCX0 1101 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 BICC1Q9H694 974 aaKnown RBP21.29■■□□□ 1
CLIP2-201ENST00000223398 WDR62O43379 1518 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 EYA3Q99504 573 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 MPHOSPH6Q99547 160 aaKnown RBP21.29■■□□□ 1
CLIP2-201ENST00000223398 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
CLIP2-201ENST00000223398 PRKCSHP14314 528 aaPredicted RBP21.28■■□□□ 1
CLIP2-201ENST00000223398 FAM193AP78312 1265 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 NMIQ13287 307 aaPredicted RBP21.28■■□□□ 1
CLIP2-201ENST00000223398 CHST3Q7LGC8 479 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 DNAI2Q9GZS0 605 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 LDHBP07195 334 aaKnown RBP21.28■■□□□ 1
CLIP2-201ENST00000223398 CCDC112Q8NEF3 446 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 TESK2Q96S53 571 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 SPA17Q15506 151 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 RTN1Q16799 776 aa21.28■■□□□ 1
CLIP2-201ENST00000223398 VAMP4O75379 141 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 TAX1BP1Q86VP1 789 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 GOLGA6L10A6NI86 522 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 MTIF2P46199 727 aaKnown RBP21.27■■□□□ 1
CLIP2-201ENST00000223398 CCDC40Q4G0X9 1142 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 CCDC183Q5T5S1 534 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 ZNF790Q6PG37 636 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 BICD1Q96G01 975 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 MMRN2Q9H8L6 949 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 PLEKHH1Q9ULM0 1364 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 LMOD1P29536 600 aaPredicted RBP21.27■■□□□ 1
CLIP2-201ENST00000223398 CA8P35219 290 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 ANKRD2Q9GZV1 360 aa21.27■■□□□ 1
CLIP2-201ENST00000223398 UFL1O94874 794 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 KIF20AO95235 890 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 TNNT1P13805 278 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 TDRD12Q587J7 1177 aaKnown RBP21.26■□□□□ 0.99
CLIP2-201ENST00000223398 JAKMIP3Q5VZ66 844 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLIP2-201ENST00000223398 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 ALG1Q9BT22 464 aa21.26■□□□□ 0.99
CLIP2-201ENST00000223398 A1BGP04217 495 aa21.25■□□□□ 0.99
CLIP2-201ENST00000223398 AMPD3Q01432 767 aa21.25■□□□□ 0.99
CLIP2-201ENST00000223398 SMARCC2Q8TAQ2 1214 aa21.25■□□□□ 0.99
CLIP2-201ENST00000223398 MACROD2A1Z1Q3 448 aa21.25■□□□□ 0.99
CLIP2-201ENST00000223398 FGFR1OPO95684 399 aaKnown RBP21.25■□□□□ 0.99
CLIP2-201ENST00000223398 NAPAP54920 295 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms